prot_M-pyrifera_M_contig112303.2579.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112303.2579.1
Unique Nameprot_M-pyrifera_M_contig112303.2579.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length92
Homology
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BLAST of mRNA_M-pyrifera_M_contig112303.2579.1 vs. uniprot
Match: A0A218XTM9_PUNGR (SREBP regulating gene protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XTM9_PUNGR)

HSP 1 Score: 68.2 bits (165), Expect = 1.270e-11
Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:    2 GLSCNQVCAAQGRRCDQASLPLINKCSWLEEAHPSICTDACSVSEGPDQPALIAPNAPK--TPNACLQSADDFAPRCEGKWEFAQRLCPCA 90
            G  C+ VC + G+ C  + L L+N+C  +++     C  AC  S+G DQPA +A +AP+   P ACL +       C+G     +RLCPCA
Sbjct:  191 GEPCDSVCKSVGQSCVPSKLSLLNQCEIMQKYMS--CKGACLASDGADQPAEVAEDAPRHLNPGACLYTQTQSLLSCDGSHRHTRRLCPCA 279
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112303.2579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A218XTM9_PUNGR1.270e-1137.36SREBP regulating gene protein n=2 Tax=Punica grana... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112303contigM-pyrifera_M_contig112303:140..415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112303.2579.1mRNA_M-pyrifera_M_contig112303.2579.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112303 140..415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112303.2579.1 ID=prot_M-pyrifera_M_contig112303.2579.1|Name=mRNA_M-pyrifera_M_contig112303.2579.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
PGLSCNQVCAAQGRRCDQASLPLINKCSWLEEAHPSICTDACSVSEGPDQ
PALIAPNAPKTPNACLQSADDFAPRCEGKWEFAQRLCPCAA*
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