prot_M-pyrifera_M_contig112295.2575.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112295.2575.1
Unique Nameprot_M-pyrifera_M_contig112295.2575.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
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BLAST of mRNA_M-pyrifera_M_contig112295.2575.1 vs. uniprot
Match: A0A2E7KDA4_9PLAN (SMI1_KNR4 domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KDA4_9PLAN)

HSP 1 Score: 249 bits (636), Expect = 2.960e-78
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0 
Query:    1 LEYQNEKVRYDATLGLRDIRAWEAIETVIAVLEHETDSLVRGSILQMLGELDSVASRETLLAWMVKGDEVERMHAYEGLNKLGDERAKPLFQQLKQEKEHATQNDNTPDESVFQNRHWWWPWK 123
            LEYQNEKVRYDATLGLRDIRAWEAIETVIAVLEHETDSLVRGSILQMLGELDSVASRETLLAWMVKGDEVERMHAYEGLNKLGDERA PLFQQLKQEKEHATQNDNTPDESVFQNRHWWWPWK
Sbjct:  430 LEYQNEKVRYDATLGLRDIRAWEAIETVIAVLEHETDSLVRGSILQMLGELDSVASRETLLAWMVKGDEVERMHAYEGLNKLGDERAMPLFQQLKQEKEHATQNDNTPDESVFQNRHWWWPWK 552
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BLAST of mRNA_M-pyrifera_M_contig112295.2575.1 vs. uniprot
Match: A0A517W523_9PLAN (Putative lyase n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517W523_9PLAN)

HSP 1 Score: 106 bits (265), Expect = 2.110e-24
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0 
Query:    1 LEYQNEKVRYDATLGLRDIRAWEAIETVIAVLEHETDSLVRGSILQMLGELDSVASRETLLAWMVKGDEVERMHAYEGLNKLGDERAKPLFQQLKQE 97
            LE++N+ +R+ ATLGLR I+A EAI  VI +LE + D LVRGSIL MLGELDS  SRETLL W  KGD+  R+ A +GL KLGDER  P+ +Q+ QE
Sbjct:  430 LEHRNDTIRFYATLGLRKIKALEAIPIVIPLLETDVDPLVRGSILHMLGELDSRQSRETLLNWTEKGDDDARLDAVDGLCKLGDERVIPVARQMLQE 526
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112295.2575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E7KDA4_9PLAN2.960e-7899.19SMI1_KNR4 domain-containing protein n=5 Tax=Gimesi... [more]
A0A517W523_9PLAN2.110e-2459.79Putative lyase n=2 Tax=Gimesia chilikensis TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13646HEAT_2coord: 26..98
e-value: 1.4E-7
score: 31.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..111
e-value: 9.9E-12
score: 46.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112295contigM-pyrifera_M_contig112295:213..584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112295.2575.1mRNA_M-pyrifera_M_contig112295.2575.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112295 213..584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112295.2575.1 ID=prot_M-pyrifera_M_contig112295.2575.1|Name=mRNA_M-pyrifera_M_contig112295.2575.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
LEYQNEKVRYDATLGLRDIRAWEAIETVIAVLEHETDSLVRGSILQMLGE
LDSVASRETLLAWMVKGDEVERMHAYEGLNKLGDERAKPLFQQLKQEKEH
ATQNDNTPDESVFQNRHWWWPWK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold