prot_M-pyrifera_M_contig112290.2572.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112290.2572.1
Unique Nameprot_M-pyrifera_M_contig112290.2572.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A5A8CN92_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CN92_CAFRO)

HSP 1 Score: 146 bits (369), Expect = 4.600e-38
Identity = 82/139 (58.99%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDE--SVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLY 137
            A++S LV +DR  DD+  +  L   L  P   L+ AA RVA+ S++A I IE+D+Y+KS    +M+ VF WA+GA F+ V   TK FEGSIIRVIRRLEELLRQLADAAR+IG+ ALE KF A+S +MRRDIVFAASLY
Sbjct: 1076 ALMSCLVASDRSKDDDEGAESLAPELGGPLRVLQEAARRVARVSEEAGIEIEVDDYVKSMSPSLMQVVFSWASGARFSEVATMTKEFEGSIIRVIRRLEELLRQLADAARAIGDEALESKFKASSTAMRRDIVFAASLY 1214          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A812X2H8_9DINO (MTREX protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X2H8_9DINO)

HSP 1 Score: 143 bits (360), Expect = 4.110e-37
Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS LV+T+ G+  +S  LP  L  P   L+  A RVA  S DA++ ++++EY++ F+ DMME V+ W  G+ FA +C  TK FEGS+IRVIRRLEELLRQLADA++S+G   L +KF AA+ ++RRDI+FAASLY+
Sbjct:  521 ALLSCLVYTEHGDVADS-SLPDTLSGPLTTLRETARRVATVSADAKLEVDVEEYVEHFKCDMMEVVYAWTKGSKFADICALTKVFEGSVIRVIRRLEELLRQLADASKSVGELTLHDKFLAAAKAIRRDIIFAASLYL 657          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A0C9RTP3_AMBAM (Putative cytoplasmic exosomal rna helicase ski2 dead-box superfamily protein (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9RTP3_AMBAM)

HSP 1 Score: 131 bits (329), Expect = 1.240e-35
Identity = 69/138 (50.00%), Postives = 97/138 (70.29%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS LV  ++ N  E  +L + L  P  +++  A RVAQ +KDA++ I+ D Y+ SF+  +M++V+ W+ G+ FA VC+ T  FEGSIIR +RRLEELLRQ+  AA+ IGNS LE KF+ A   ++RDIVFAASLY+
Sbjct:   80 ALLSCLVFQEKSN--EMPNLTEELSGPLRQMQDIARRVAQVTKDAKLCIDEDTYVSSFKPHLMDAVYAWSKGSSFAQVCRMTDVFEGSIIRCMRRLEELLRQIVQAAKCIGNSELENKFSEAVKLIKRDIVFAASLYL 215          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A7S2BI41_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI41_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.180e-35
Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDES-VHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS LV  DR  + E    L + L  P   ++ AA  +A+ S +A++ ++ +EY++SF  D+ME+V+ WA GA F  V K T AFEGS+IR+IRRLEELLRQLA A+  IGN  L++KF+  +  MRRDIVFAASLY+
Sbjct:   57 AMLSCLVFQDRRKEQEGGPQLRENLAGPYRMVQEAARLIAKVSVEAKLDLDAEEYVQSFNPDLMEAVYEWATGAKFVEVMKLTDAFEGSVIRIIRRLEELLRQLASASFVIGNKDLKQKFDECAGRMRRDIVFAASLYL 195          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A8B7DK02_HYDVU (superkiller viralicidic activity 2-like 2 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DK02_HYDVU)

HSP 1 Score: 132 bits (331), Expect = 2.690e-34
Identity = 65/138 (47.10%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS  V  ++G  DE   L + L  P  ++K +A R+A+ S++A++ I++DEYI SF+  MM+ V+ W+ G+ FA +CK T  FEGS+IR +RRL+ELLRQ+  AA++IGN+ LE KF+     ++RDI+FAASLY+
Sbjct:  248 ALLSCFVFQEKG--DEVAKLSETLAGPLRQMKESARRIAKISEEAKMEIDVDEYIDSFKPQMMDVVYAWSTGSTFADICKMTDVFEGSVIRCMRRLDELLRQMCQAAKAIGNTELENKFSDGITKIKRDIIFAASLYL 383          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A7S2XGX2_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XGX2_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 1.160e-33
Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 0
Query:   27 PAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            P  +++    +VA A +DAR+PI++D+++  F+  MM+ VF W  GA F  +CK T  FEG+IIR IRRLEELLRQ+A AA+ IGNS LEEKF      ++RDI+FAASLY+
Sbjct:    7 PLRQMRECIKKVATAIEDARLPIDVDDFVDQFKPSMMDIVFAWVKGAKFVDICKLTDIFEGTIIRCIRRLEELLRQMASAAKLIGNSDLEEKFQEGIKKLKRDIIFAASLYL 118          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: T0S321_SCHJY (Uncharacterized protein n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=T0S321_SCHJY)

HSP 1 Score: 132 bits (332), Expect = 4.390e-33
Identity = 67/138 (48.55%), Postives = 101/138 (73.19%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS LV  ++ ND E++HL + L  P + L+  A R+A+ S+++++ +  DEY++SF+  +M  VF WA+GA FA +CK T  +EGS+IR+ RRLEELLRQ+ DAA+ IGN+AL++K   + A + RDIVF+ASLY+
Sbjct:  960 ALLSCLVFQEKSND-ENLHLKEELSGPHKILQEMARRIAKVSQESKLNVIEDEYVESFKPSLMPVVFAWAHGATFAHICKMTDVYEGSLIRMFRRLEELLRQMGDAAKVIGNTALQKKMEDSIACIHRDIVFSASLYL 1096          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: D0NDN9_PHYIT (DSHCT domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NDN9_PHYIT)

HSP 1 Score: 124 bits (312), Expect = 5.000e-33
Identity = 60/138 (43.48%), Postives = 95/138 (68.84%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS L++T++  + +     + L+ P  +L+  A R+A+  +DA++ I++DEY  +F  ++++ V  W  GA F+ +CK + AFEG+IIR +RRLEELLRQ+  AA SIG+  LE+KF+     ++RDIVFAASLY+
Sbjct:   82 ALLSCLINTEKKKESDKPPQAESLEVPVRQLRETAQRIAKVMQDAKMTIDVDEYAGAFNTNLVDVVIAWCQGAKFSQICKMSDAFEGTIIRCLRRLEELLRQVTLAAHSIGDVELEKKFDEGGKKLKRDIVFAASLYL 219          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: L7MI60_RHIPC (Putative nuclear exosomal rna helicase mtr4 dead-box superfamily (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MI60_RHIPC)

HSP 1 Score: 129 bits (323), Expect = 5.130e-33
Identity = 67/138 (48.55%), Postives = 96/138 (69.57%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A+LS LV  ++ N  E  +L + L  P  +++  A R+A+ +KDA++ I+ D Y+ SF+  +M+ ++ W+ GA FA VC+ T  FEGSIIR +RRLEELLRQ+  AA+ IGN+ LE KF+ A   M+RDIVFAASLY+
Sbjct:  263 ALLSCLVFQEKSN--EMPNLTEELSGPLRQMQDIARRIARVTKDAKLCIDEDTYVSSFKPHLMDVIYAWSKGASFAHVCRMTDVFEGSIIRCMRRLEELLRQIVQAAKCIGNTELENKFSEAIKLMKRDIVFAASLYL 398          
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A0G4IPE5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IPE5_PLABS)

HSP 1 Score: 132 bits (331), Expect = 5.950e-33
Identity = 70/139 (50.36%), Postives = 99/139 (71.22%), Query Frame = 0
Query:    1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKA-FEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 138
            A++S LV+T++G  DE++HL +PL  P   L+  A R+A+ S ++++ ++  EY+ SF+ D+M  V  W  GA FA VCK   + FEGSIIR +RRLEELLRQL+ AA+ IGN+ LE KF+   A ++RDIVFAASLY+
Sbjct:  888 ALVSCLVYTEKG--DENLHLEEPLAAPLRTLRDHAKRIAEVSNESKLQLDTTEYVSSFKPDLMPLVQAWCRGAKFADVCKMAPSIFEGSIIRCMRRLEELLRQLSSAAKLIGNADLETKFDQGIALIKRDIVFAASLYL 1024          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CN92_CAFRO4.600e-3858.99Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A812X2H8_9DINO4.110e-3752.90MTREX protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A0C9RTP3_AMBAM1.240e-3550.00Putative cytoplasmic exosomal rna helicase ski2 de... [more]
A0A7S2BI41_9STRA8.180e-3550.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8B7DK02_HYDVU2.690e-3447.10superkiller viralicidic activity 2-like 2 n=1 Tax=... [more]
A0A7S2XGX2_9EUKA1.160e-3352.68Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
T0S321_SCHJY4.390e-3348.55Uncharacterized protein n=1 Tax=Schizosaccharomyce... [more]
D0NDN9_PHYIT5.000e-3343.48DSHCT domain-containing protein n=1 Tax=Phytophtho... [more]
L7MI60_RHIPC5.130e-3348.55Putative nuclear exosomal rna helicase mtr4 dead-b... [more]
A0A0G4IPE5_PLABS5.950e-3350.36Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableGENE3D1.10.3380.30coord: 1..131
e-value: 4.5E-38
score: 133.1
NoneNo IPR availablePANTHERPTHR12131:SF13DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH10coord: 2..138
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 2..138
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 1..138
e-value: 8.6E-42
score: 154.8
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 1..133
e-value: 1.4E-33
score: 115.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112290contigM-pyrifera_M_contig112290:2..421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112290.2572.1mRNA_M-pyrifera_M_contig112290.2572.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112290 2..421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112290.2572.1 ID=prot_M-pyrifera_M_contig112290.2572.1|Name=mRNA_M-pyrifera_M_contig112290.2572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIE
IDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELL
RQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012961Ski2_C