prot_M-pyrifera_M_contig11215.2556.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11215.2556.1
Unique Nameprot_M-pyrifera_M_contig11215.2556.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length400
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11215.2556.1 vs. uniprot
Match: A0A6H5KFY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.250e-8
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:  336 LVSAMVLGLNKVWRQSERRHVLRLRNRYQLELAAAHRRLQMLKPMEIVTAERAAKCR 392
            L+  ++LGLN  WR SERRHV RLR RY+ ELAAAHRRL M KP+E V  ERAA+ R
Sbjct:  526 LLWGLLLGLNACWRLSERRHVERLRTRYRAELAAAHRRLHMRKPLEEVVGERAAERR 582
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11215.2556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFY4_9PHAE2.250e-864.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11215contigM-pyrifera_M_contig11215:1064..9494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11215.2556.1mRNA_M-pyrifera_M_contig11215.2556.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11215 1064..9494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11215.2556.1 ID=prot_M-pyrifera_M_contig11215.2556.1|Name=mRNA_M-pyrifera_M_contig11215.2556.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=400bp
SCTTEYAQFRRLWDDSGGLTHADNINNNDNERGPRFCNGGRSDRVAIDHS
STSNISTTTSCGSSSSSSGRSSSSNHSSTVRTGSPGGGGSGATPTGRTDT
ACSSQPPPPHSAPSSSPPPPPPPPPPPPPLQTPPYTTALSQQHAAVPTAA
AGEGRREWEEAMRSEWSSPSDKIHGIAVLASPVVAGTCTAAEPAAGGAVM
MAGKAAAGTGAEGGGESRWMRPGRGVEAGRRSETTTGGGSGAVEIGTNGC
GGWSGAGGSRGIGATRWGRVDLLSVLYPPPPPPSTGSAGGGARPLHPSGG
EEAMWVPRDAVGLCRRFISDFDRCSGLPLDLEQRSLVSAMVLGLNKVWRQ
SERRHVLRLRNRYQLELAAAHRRLQMLKPMEIVTAERAAKCRPPPSTPTT
back to top