prot_M-pyrifera_M_contig112070.2528.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112070.2528.1
Unique Nameprot_M-pyrifera_M_contig112070.2528.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A1G0E5I3_9GAMM (LysM domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1G0E5I3_9GAMM)

HSP 1 Score: 223 bits (567), Expect = 1.180e-69
Identity = 106/187 (56.68%), Postives = 135/187 (72.19%), Query Frame = 0
Query:    1 MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEA-RKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ++ ANP I  YK+  G  + +P Q+ILP  K+R+GIVIN+PE+RLYYF  DG+ + TYPV LGR  WRTP+    VVRK+E PTW+VP SI+     K G  LPD++PPGP+NPLG YA+YL   GYLIHGT +PNS+G  +SSGC+R+  + +  LY  V+ G PV II YPNK GWRG+KLYLES
Sbjct:   64 LLEANPNINFYKLKVGQRIFIPKQFILP--KFRQGIVINIPELRLYYFDPDGSHVHTYPVGLGRMGWRTPMAAATVVRKEEDPTWYVPNSIRDYVLNKTGELLPDAVPPGPKNPLGKYALYLSKNGYLIHGTNAPNSVGTFISSGCMRLLREPIELLYQEVQVGTPVRIINYPNKAGWRGDKLYLES 248          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: K2DRN8_9BACT (LysM domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2DRN8_9BACT)

HSP 1 Score: 216 bits (551), Expect = 3.090e-67
Identity = 103/187 (55.08%), Postives = 131/187 (70.05%), Query Frame = 0
Query:    1 MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEA-RKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ++ ANP I  Y++  G  VI+P Q+ILP  K+R+GIVIN  E+RLYYF  DG  I T+PV LGR  WRTPL    VVRK+  P WHVP  I+    +K G  LP+++PPGP+NPLG YA+YL   GYLIHGT +P+S+G  +SSGC+R+  + +  LY   + G PV II+YPNK GWRGNKLYLES
Sbjct:   63 LLEANPNINFYRLRVGQKVIIPKQFILP--KFRRGIVINAAELRLYYFTPDGEYIHTFPVGLGRVDWRTPLASATVVRKEADPVWHVPNDIRDYVYKKTGELLPENVPPGPKNPLGSYALYLSKSGYLIHGTNAPHSVGTFISSGCMRLMREPIEMLYQEAQVGTPVHIIHYPNKAGWRGNKLYLES 247          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2D6YD82_9GAMM (LysM domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D6YD82_9GAMM)

HSP 1 Score: 216 bits (549), Expect = 3.840e-67
Identity = 110/184 (59.78%), Postives = 138/184 (75.00%), Query Frame = 0
Query:    4 ANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAE-ARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ANP I   K+  G  VI+P Q+ILPPQ++RKGIV+N+ E+RLYYF+ +G  I TYPV++GR  WRTP   T +V+ +E PTWHVP SI A    K G ELP+SIPPGP NPLG  AIYLG+P YLIHGT +P+SIG+ VSSGCIRM+N+DV  L+  VK GDPV+II +  KVG + N+LYLE+
Sbjct:   58 ANPTISRLKV--GDVVIIPKQFILPPQEFRKGIVLNMAELRLYYFSPNGQFIFTYPVSMGRIGWRTPSASTTIVKMKEYPTWHVPESIAAHHLEKTGNELPESIPPGPDNPLGTRAIYLGLPKYLIHGTNAPSSIGQYVSSGCIRMYNQDVEQLFMFVKPGDPVTIINHRIKVGVKDNQLYLEA 239          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A0S7Y0H2_9COXI (LysM domain-containing protein n=1 Tax=Coxiella sp. DG_40 TaxID=1703354 RepID=A0A0S7Y0H2_9COXI)

HSP 1 Score: 206 bits (523), Expect = 3.170e-63
Identity = 101/188 (53.72%), Postives = 132/188 (70.21%), Query Frame = 0
Query:    1 MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPG-PRNPLGPYAIYLG-MPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ++ ANP+I P  ++PGT V++P Q+ILP  KYRKGIVIN+PE+RLYYF  D   + T PV LGR+ WRTP   T V++K+ +PTWHVP +I     KNG ++P+ +PPG P NPLG Y +YLG   GYLIHG   P++IG+  SSGCIR++N  +  LYS V  G  V II+ P+KVGW   +LYLES
Sbjct:   57 LLEANPEINPKNLIPGTKVLIPTQFILP--KYRKGIVINIPELRLYYFMPDREHVFTTPVGLGRDSWRTPTMLTGVIKKEANPTWHVPKTILKHEAKNGHQIPNEVPPGDPDNPLGNYVLYLGGKGGYLIHGNNEPDTIGKYYSSGCIRLYNSAMETLYSMVAVGTLVRIIHDPDKVGWLNGELYLES 242          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A423Q2R7_9GAMM (YkuD domain-containing protein n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423Q2R7_9GAMM)

HSP 1 Score: 203 bits (517), Expect = 4.710e-62
Identity = 97/187 (51.87%), Postives = 130/187 (69.52%), Query Frame = 0
Query:    4 ANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-----ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ANP++ P+    GT V++P +Y+LP    R+GIVIN+PEMR+YYF  +G+     + T+P+ +GRE W TPLGKT +VRK+  PTW  PASI+ E    G ELPD +P GP NPLG +A+YLGMP YL+HGT  P  IG  VS GCIR++ +D+  L+S V+ G PV+II  P K+G  GN LY+E+
Sbjct:   68 ANPEVDPWLPGEGTEVVIPTRYVLPDVP-RRGIVINIPEMRVYYFPPEGSEYAGRVVTHPLGIGREGWSTPLGKTTIVRKKADPTWTPPASIRKEHAAQGEELPDVVPAGPDNPLGQHALYLGMPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFSMVEPGTPVNIISEPYKIGREGNTLYIEA 253          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2E0J076_9GAMM (L,D-transpeptidase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0J076_9GAMM)

HSP 1 Score: 203 bits (517), Expect = 5.430e-62
Identity = 98/187 (52.41%), Postives = 127/187 (67.91%), Query Frame = 0
Query:    4 ANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAAD-----GTISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ANP + P+    GT V++P +Y+LP    RKGIVIN+PEMRLYY+  +     G + TYP+ +GRE W TPL KT +VRK+  PTW  PASI+AE  K G  LP  +P GP NPLG +A+YLG+P YL+HGT  P  IG  VS GCIR++ +D+  L++ V  G PV+II  P K+GW GN LY+ES
Sbjct:   74 ANPDVDPWLPGEGTPVVIPTRYVLP-DVARKGIVINIPEMRLYYYPPENSEYAGKVVTYPLGIGREGWSTPLAKTSIVRKKADPTWTPPASIRAEHEKAGDPLPAVVPAGPDNPLGQHALYLGLPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFALVPTGTPVNIISQPYKIGWEGNTLYIES 259          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: U2E4I5_9GAMM (Peptidoglycan LD-transpeptidase lipoprotein YkuD family SPOR domain-containing n=2 Tax=Salinisphaera TaxID=180541 RepID=U2E4I5_9GAMM)

HSP 1 Score: 200 bits (509), Expect = 8.980e-61
Identity = 97/187 (51.87%), Postives = 126/187 (67.38%), Query Frame = 0
Query:    4 ANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-----ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            +NP + P+    GT +++P  Y+LP    RKGIVIN+PEMRLYYF   G+     + TYP+ +GRE W TPL KT VVRK+  PTW  PASI+AE  K G  LP  +P GP NPLG +A+YLG+P YL+HGT  P  IG  VS GCIR++ +D+  L++ V  G PV+I+  P K+GW GN LY+ES
Sbjct:   75 SNPDVDPWLPGDGTPMVIPTHYVLP-NVPRKGIVINIPEMRLYYFPPAGSEYAGKVVTYPLGIGREGWSTPLAKTTVVRKRADPTWTPPASIRAEHEKAGDPLPAVVPAGPDNPLGQHALYLGLPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFALVPTGTPVNIVSEPYKIGWEGNTLYIES 260          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2E3MFB4_9GAMM (LysM domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MFB4_9GAMM)

HSP 1 Score: 199 bits (507), Expect = 1.900e-60
Identity = 89/186 (47.85%), Postives = 130/186 (69.89%), Query Frame = 0
Query:    1 MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADG-TISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ++ ANP++ P + + GT ++VP +++LP +  RKGIVIN+ E+RLYY+  +  T+ TYP+ +GR+ W TP G   ++++++ P W VPAS+ A+A +NG  LP  +PPGP NPLG YA+ L  P YLIHGT  PN +GR VS+GCIRM+ +D+  +YS+V    PV+I+  P K GW   KLYLE+
Sbjct:   83 LLEANPQVNPMQPIAGTKILVPTRFVLP-KAPRKGIVINLAELRLYYYPPNSNTVQTYPIGIGRQGWETPTGTLKIIQRKKDPAWRVPASVWADAAENGIVLPKVVPPGPDNPLGQYALRLSRPNYLIHGTNKPNGVGRRVSAGCIRMYPEDIKRMYSQVSINTPVTIVNQPFKTGWLNGKLYLEA 267          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A3M0YCQ1_9GAMM (L,D-transpeptidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YCQ1_9GAMM)

HSP 1 Score: 199 bits (507), Expect = 9.150e-60
Identity = 95/186 (51.08%), Postives = 128/186 (68.82%), Query Frame = 0
Query:    1 MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 185
            ++  NP + P+    GT +++P Q++LP +  R+GIV+N+PEMRLYY+   G  + TYPV +GRE W TPLGKT +V +  +P+W+ PASI+ E    G  LP  +PPGP NPLG +A+ LG PGYLIHGT  P  IG  VS GCIR++ +D+ +L+SRVK G PV II  P K GW+  KLYLE+
Sbjct:   55 LVRVNPGVDPWLPGEGTEIVLPTQFVLP-RAPREGIVLNLPEMRLYYYPPGGREVVTYPVGIGREGWDTPLGKTRIVARVANPSWYPPASIRKEHEAQGDPLPKVVPPGPDNPLGDFALRLGFPGYLIHGTNKPYGIGMRVSHGCIRLYPEDIAELFSRVKVGTPVHIIDQPYKAGWKEGKLYLEA 239          
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A426W368_9GAMM (LysM domain-containing protein n=8 Tax=Bacteria TaxID=2 RepID=A0A426W368_9GAMM)

HSP 1 Score: 196 bits (497), Expect = 3.570e-59
Identity = 92/182 (50.55%), Postives = 122/182 (67.03%), Query Frame = 0
Query:    4 ANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFA-ADGTISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLE 184
            ANPK+ P+    G+ ++VP QYILPP   R G+VIN+ EMRLYY+  A   + T+P+ +GRE W TP G T ++RK++ P W VP SI  E  + G  LP  +PPGP NPLG YA+YLGMPGYL+HGT  P  +G  VS GCIR++ +D+++ +S V K  PV II  P K GW   KL+L+
Sbjct:   64 ANPKVDPWLPKEGSQILVPQQYILPPGP-RNGVVINLAEMRLYYYPEARNEVMTFPLGIGREGWNTPTGDTRIIRKKKDPAWVVPESILQEHEEKGDPLPSVVPPGPDNPLGGYALYLGMPGYLLHGTNKPYGVGLRVSHGCIRLYPEDISNFFSEVPKDTPVRIINQPYKAGWLNGKLFLQ 244          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G0E5I3_9GAMM1.180e-6956.68LysM domain-containing protein n=3 Tax=Gammaproteo... [more]
K2DRN8_9BACT3.090e-6755.08LysM domain-containing protein n=1 Tax=uncultured ... [more]
A0A2D6YD82_9GAMM3.840e-6759.78LysM domain-containing protein n=1 Tax=Legionellal... [more]
A0A0S7Y0H2_9COXI3.170e-6353.72LysM domain-containing protein n=1 Tax=Coxiella sp... [more]
A0A423Q2R7_9GAMM4.710e-6251.87YkuD domain-containing protein n=2 Tax=Salinisphae... [more]
A0A2E0J076_9GAMM5.430e-6252.41L,D-transpeptidase n=2 Tax=Gammaproteobacteria Tax... [more]
U2E4I5_9GAMM8.980e-6151.87Peptidoglycan LD-transpeptidase lipoprotein YkuD f... [more]
A0A2E3MFB4_9GAMM1.900e-6047.85LysM domain-containing protein n=1 Tax=Legionellal... [more]
A0A3M0YCQ1_9GAMM9.150e-6051.08L,D-transpeptidase n=1 Tax=Gammaproteobacteria bac... [more]
A0A426W368_9GAMM3.570e-5950.55LysM domain-containing protein n=8 Tax=Bacteria Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038063L,D-transpeptidase catalytic domain-likeGENE3D2.40.440.10coord: 1..185
e-value: 1.8E-69
score: 236.1
IPR038063L,D-transpeptidase catalytic domain-likeSUPERFAMILY141523L,D-transpeptidase catalytic domain-likecoord: 35..167
IPR005490L,D-transpeptidase catalytic domainPFAMPF03734YkuDcoord: 34..167
e-value: 2.3E-24
score: 86.5
NoneNo IPR availablePANTHERPTHR30582UNCHARACTERIZEDcoord: 20..175
NoneNo IPR availablePANTHERPTHR30582:SF24L,D-TRANSPEPTIDASE YBIS-RELATEDcoord: 20..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112070contigM-pyrifera_M_contig112070:32..586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112070.2528.1mRNA_M-pyrifera_M_contig112070.2528.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112070 5..586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112070.2528.1 ID=prot_M-pyrifera_M_contig112070.2528.1|Name=mRNA_M-pyrifera_M_contig112070.2528.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAA
DGTISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRE
LPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNK
DVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038063Transpep_catalytic_dom
IPR005490LD_TPept_cat_dom