prot_M-pyrifera_M_contig112042.2521.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112042.2521.1
Unique Nameprot_M-pyrifera_M_contig112042.2521.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
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BLAST of mRNA_M-pyrifera_M_contig112042.2521.1 vs. uniprot
Match: A0A7S4N4K6_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4N4K6_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 1.110e-15
Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 0 
Query:    7 NDCSNHGVCVQPGY-CTCSSGWGGEDCSVADQLVVSGTTL-DAHLETYSWQYYHI-VTGAADEGLLVEVTQTSDLGDIDLYLGLNSYPTTHSYIYKDSSSTSRTMSAQINDVREGTYYVGLYGYCAADYEI 134
            N+C+ HG C    + C+C + W G+DCS     + +G  + D  + T  W Y+HI VT      L+VEV QTS  GD+D Y+ +   P+   + ++D S+ S       +   E  YY+G+YG+ +A Y I
Sbjct:   17 NECNGHGTCEPVTFTCSCENNWSGQDCSTYQLPLENGVPVNDLTVNTRVWNYFHIQVTEGTRSDLVVEVNQTSLGGDVDTYIRVGDLPSRSVWDFRDISTGSNAKIEIEHPETESPYYIGVYGFLSARYNI 147
[Close]
BLAST of mRNA_M-pyrifera_M_contig112042.2521.1 vs. uniprot
Match: A0A7S4JIG7_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JIG7_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 1.260e-15
Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 0 
Query:    7 NDCSNHGVCVQPGY-CTCSSGWGGEDCSVADQLVVSGTTL-DAHLETYSWQYYHI-VTGAADEGLLVEVTQTSDLGDIDLYLGLNSYPTTHSYIYKDSSSTSRTMSAQINDVREGTYYVGLYGYCAADYEI 134
            N+C+ HG C    + C+C + W G+DCS     + +G  + D  + T  W Y+HI VT      L+VEV QTS  GD+D Y+ +   P+   + ++D S+ S       +   E  YY+G+YG+ +A Y I
Sbjct:   17 NECNGHGTCEPVTFTCSCENNWSGQDCSTYQLPLENGVPVNDLTVNTRVWNYFHIQVTEGTRSDLVVEVNQTSLGGDVDTYIRVGDLPSRSVWDFRDISTGSNAKIEIEHPETESPYYIGVYGFLSARYNI 147
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112042.2521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4N4K6_9EUKA1.110e-1534.35Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S4JIG7_9EUKA1.260e-1534.35Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.25.10coord: 1..36
e-value: 5.8E-6
score: 28.2
NoneNo IPR availableGENE3D2.60.120.380coord: 37..134
e-value: 9.5E-11
score: 43.7
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 3..37
IPR000742EGF-like domainPFAMPF00008EGFcoord: 4..30
e-value: 2.1E-4
score: 21.5
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1..33
score: 13.312
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 21..32
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 21..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112042contigM-pyrifera_M_contig112042:99..515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112042.2521.1mRNA_M-pyrifera_M_contig112042.2521.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112042 99..515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112042.2521.1 ID=prot_M-pyrifera_M_contig112042.2521.1|Name=mRNA_M-pyrifera_M_contig112042.2521.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
DEPCAGNDCSNHGVCVQPGYCTCSSGWGGEDCSVADQLVVSGTTLDAHLE
TYSWQYYHIVTGAADEGLLVEVTQTSDLGDIDLYLGLNSYPTTHSYIYKD
SSSTSRTMSAQINDVREGTYYVGLYGYCAADYEIFFSLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS