prot_M-pyrifera_M_contig111911.2488.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111911.2488.1
Unique Nameprot_M-pyrifera_M_contig111911.2488.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: UPI00067DA23E (tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 n=2 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067DA23E)

HSP 1 Score: 62.8 bits (151), Expect = 3.340e-9
Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0
Query:    1 MMRTRGLLGQEEKVCFVEFRAGKGTLSLALQRA----TEGKSSHLLLDRCTFKHKA----RLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            +M   GL+  ++  C+VE  AGKG +S  L RA     E  S+ LL+DR   +HK     R D+ A +  RA +A   +  VP          V ES+ +VG+ KH+CG+A DH+LR +
Sbjct:  167 VMEQAGLV--QDHTCYVELGAGKGIVSYYLWRAWCSAPESTSAALLVDRAALRHKRDNKLRGDRIARL--RADLADLALEKVP---------IVKESQSVVGLAKHLCGVATDHALRCV 272          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A7E5W7R0_TRINI (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5W7R0_TRINI)

HSP 1 Score: 56.6 bits (135), Expect = 5.060e-7
Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 0
Query:    1 MMRTRGLLGQEEKVCFVEFRAGKGTLSLALQRA---TEGKSSHLLLDRCTFKHKA--RLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            ++   GL+   E  C+VE  AGKG LS     A     G S+ LL+DR + +HK   +L   A +  RA +A   +  VP          V+  + +VG+ KH+CG+A D++LR +
Sbjct:  176 LVEDEGLVS--ENTCYVELGAGKGHLSYYACNAWCEEGGASAALLVDRASLRHKRDNKLRGRAALRLRADLAHLALERVP---------RVAACRALVGLAKHLCGVATDYALRCI 280          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A6J2K5U4_BOMMA (tRNA:m(4)X modification enzyme TRM13 n=5 Tax=Bombyx TaxID=7090 RepID=A0A6J2K5U4_BOMMA)

HSP 1 Score: 56.6 bits (135), Expect = 5.070e-7
Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 0
Query:   11 EEKVCFVEFRAGKGTLSLALQRA--TEGKSSHLLLDRCTFKHK--ARLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            + + C+VE  AGKG LS     A      SS LL+DR T +HK   RL        RA +A   +  VP         A + ++ +VG+ KH+CG+A D++LR +
Sbjct:  177 DNETCYVELGAGKGQLSFYAHAAWCAGAGSSVLLVDRATLRHKRDGRLRGRGAARLRAELAHLALHRVP---------AAATARRLVGLAKHLCGVATDYALRCM 272          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A653BIV6_CALMS (tRNA:m(4)X modification enzyme TRM13 (Fragment) n=2 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653BIV6_CALMS)

HSP 1 Score: 54.7 bits (130), Expect = 2.400e-6
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   11 EEKVCFVEFRAGKGTLSLALQRAT--EGKSSHLLLDRCTFKHKARLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            +   C++EF AG+G LS  L  A   E  SS LL++R + KHK + +K A         +A +  V     +D    V +SK IVGV KH+CG+A D +LR L
Sbjct:  180 QPSTCYIEFGAGRGQLSFWLAHAINLEETSSILLIERASPKHK-KDNKLARNSDSIKRIRADISDV----VLDKLDGVEKSKHIVGVTKHLCGVATDLALRCL 277          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A835L6Y2_SPOEX (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835L6Y2_SPOEX)

HSP 1 Score: 53.1 bits (126), Expect = 8.450e-6
Identity = 35/112 (31.25%), Postives = 55/112 (49.11%), Query Frame = 0
Query:    1 MMRTRGLLGQEEKVCFVEFRAGKGTLSLALQRATEGKSSHL-LLDRCTFKHKARLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            +    GL+G +   C+VE  AGKG +S    +A   +   L LLDR   +HK      A    RA +    +  VP          V+ S+ ++G+ KH+CG+A D++LR +
Sbjct:  168 LAEEEGLVGGD--TCYVELGAGKGHMSYYAWQAWGAQGGALVLLDRAALRHKRDNKLRAARRLRADLRHVRLARVP---------RVANSRALLGLAKHLCGVATDYALRCV 268          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: UPI001D082E72 (tRNA:m(4)X modification enzyme TRM13 homolog n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D082E72)

HSP 1 Score: 52.0 bits (123), Expect = 2.110e-5
Identity = 34/102 (33.33%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   16 FVEFRAGKGTLSLALQRATEGKS--SHLLLDRCTFKHKA----RLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            F+EF AGKG LS  L ++TE  S  S +L+D+ + +HK     +++  +  E R    +  +L +  +  +DV   + +SK ++G+ KH+CG+A D+++R L
Sbjct:  176 FIEFGAGKGKLSFWLAKSTENISDTSIVLVDKASHRHKMDNKLKIENCSAQE-RIHRIRGDILDLDLSQ-IDV---IRKSKHVIGLTKHLCGVATDYAMRCL 272          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A401SNN2_CHIPU (tRNA:m(4)X modification enzyme TRM13 n=4 Tax=Orectolobiformes TaxID=30503 RepID=A0A401SNN2_CHIPU)

HSP 1 Score: 52.0 bits (123), Expect = 2.140e-5
Identity = 40/114 (35.09%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    2 MRTRGLLGQEEKVCFVEFRAGKGTLS----LALQRATEGKSSHLLLDRCTFKHKARLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            +   GLLG     CFVEF AG+G LS    LAL+ A    +  LL++R T + K         ++R SV +   + +   +   V   V +   +VG+GKH+CG+A D +LR L
Sbjct:  175 LERMGLLGSNR--CFVEFGAGRGKLSHWIDLALRDAEN--TYFLLVERATTRFKV----DGKHKNRGSVFERLQVDIKDLSLGQVPLLVRKRLPVVGIGKHLCGVATDLALRCL 280          
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Match: A0A813GK32_POLGL (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GK32_POLGL)

HSP 1 Score: 50.4 bits (119), Expect = 7.520e-5
Identity = 45/136 (33.09%), Postives = 62/136 (45.59%), Query Frame = 0
Query:    2 MRTRGLLG---------QEEKVCFVEFRAGKGTLSLALQRATEGKSSHLLLDRCTFKHKARLDKSAGMEHRASVAQ-AGVLSVPSNNTVDV----------------GRAVSESKGIVGVGKHVCGIALDHSLRAL 111
            M  RGLL          QE+    +EF AG+G L+LALQ    G    L+  R   K   R  ++AG+ H  ++AQ     S  S  T+D+                GRAV   + ++ V KH+CG A D +LR L
Sbjct:  212 MERRGLLKPSITGDGRLQEDAKVILEFGAGRGMLTLALQAVLTGALGILVERRIVSKRSDRALRAAGLAHGLNLAQDLSSKSSFSRLTIDIRDLDLSRAIASFGVSPGRAVG--RPVLAVSKHLCGAATDLALRCL 345          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111911.2488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI00067DA23E3.340e-936.97tRNA:m(4)X modification enzyme TRM13 homolog isofo... [more]
A0A7E5W7R0_TRINI5.060e-733.62tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Trich... [more]
A0A6J2K5U4_BOMMA5.070e-735.24tRNA:m(4)X modification enzyme TRM13 n=5 Tax=Bomby... [more]
A0A653BIV6_CALMS2.400e-638.83tRNA:m(4)X modification enzyme TRM13 (Fragment) n=... [more]
A0A835L6Y2_SPOEX8.450e-631.25tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Spodo... [more]
UPI001D082E722.110e-533.33tRNA:m(4)X modification enzyme TRM13 homolog n=1 T... [more]
A0A401SNN2_CHIPU2.140e-535.09tRNA:m(4)X modification enzyme TRM13 n=4 Tax=Orect... [more]
A0A813GK32_POLGL7.520e-533.09tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Polar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007871Methyltransferase TRM13PFAMPF05206TRM13coord: 3..111
e-value: 3.7E-11
score: 43.1
IPR039044tRNA:m(4)X modification enzyme Trm13PANTHERPTHR12998UNCHARACTERIZEDcoord: 2..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111911contigM-pyrifera_M_contig111911:3..449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111911.2488.1mRNA_M-pyrifera_M_contig111911.2488.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111911 3..473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111911.2488.1 ID=prot_M-pyrifera_M_contig111911.2488.1|Name=mRNA_M-pyrifera_M_contig111911.2488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
MMRTRGLLGQEEKVCFVEFRAGKGTLSLALQRATEGKSSHLLLDRCTFKH
KARLDKSAGMEHRASVAQAGVLSVPSNNTVDVGRAVSESKGIVGVGKHVC
GIALDHSLRAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007871Methyltransferase_TRM13
IPR039044Trm13