prot_M-pyrifera_M_contig111909.2487.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111909.2487.1
Unique Nameprot_M-pyrifera_M_contig111909.2487.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A355VXJ3_9PROT (Ribonucleotide-diphosphate reductase subunit beta (Fragment) n=1 Tax=Holosporales bacterium TaxID=2053559 RepID=A0A355VXJ3_9PROT)

HSP 1 Score: 102 bits (253), Expect = 1.030e-27
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGGALSWD
Sbjct:    8 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALSWD 52          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A351KS37_9GAMM (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A351KS37_9GAMM)

HSP 1 Score: 97.1 bits (240), Expect = 1.600e-24
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLP+QYPGA NPFPWMSE++DLKKEKNFFETRVTEYQTGGAL+WD
Sbjct:  110 GLPDQYPGAQNPFPWMSEILDLKKEKNFFETRVTEYQTGGALNWD 154          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A6L7MX87_9GAMM (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7MX87_9GAMM)

HSP 1 Score: 96.3 bits (238), Expect = 2.880e-24
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPE+YPGA NPFPWMSE++DLKKEKNFFETRVTEYQTGGAL+WD
Sbjct:  106 GLPERYPGARNPFPWMSEIMDLKKEKNFFETRVTEYQTGGALNWD 150          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: UPI00190DD1C7 (ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Halochromatium glycolicum TaxID=85075 RepID=UPI00190DD1C7)

HSP 1 Score: 102 bits (253), Expect = 2.900e-24
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGGALSWD
Sbjct:  433 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALSWD 477          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: UPI001903A8F5 (ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Rhabdochromatium marinum TaxID=48729 RepID=UPI001903A8F5)

HSP 1 Score: 102 bits (253), Expect = 3.010e-24
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGGALSWD
Sbjct:  440 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALSWD 484          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A661GM43_9GAMM (Ribonucleotide-diphosphate reductase subunit beta (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GM43_9GAMM)

HSP 1 Score: 94.0 bits (232), Expect = 3.840e-24
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GL EQYPGA NPFPWMSE++DL+KEKNFFETRVTEYQTGGALSWD
Sbjct:   40 GLAEQYPGAQNPFPWMSEMMDLRKEKNFFETRVTEYQTGGALSWD 84          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A5M8FHC0_9GAMM (Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Thiohalocapsa marina TaxID=424902 RepID=A0A5M8FHC0_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 5.020e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGG+LSWD
Sbjct:  371 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGSLSWD 415          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A846HNY3_9GAMM (Ribonucleoside-diphosphate reductase subunit beta n=3 Tax=Chromatiaceae TaxID=1046 RepID=A0A846HNY3_9GAMM)

HSP 1 Score: 100 bits (249), Expect = 5.640e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGA+NPFPWMSEV+DLKKEKNFFETRVTEYQTGGALSWD
Sbjct:  348 GLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALSWD 392          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: A0A6N8ECA3_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=A0A6N8ECA3_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 6.980e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGGAL+WD
Sbjct:  417 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALNWD 461          
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Match: W9VUJ8_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Imhoffiella purpurea TaxID=1249627 RepID=W9VUJ8_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 7.100e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD 45
            GLPEQYPGATNPFPWMSEV+DLKKEKNFFETRVTEYQTGGAL+WD
Sbjct:  420 GLPEQYPGATNPFPWMSEVLDLKKEKNFFETRVTEYQTGGALNWD 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111909.2487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355VXJ3_9PROT1.030e-2797.78Ribonucleotide-diphosphate reductase subunit beta ... [more]
A0A351KS37_9GAMM1.600e-2488.89Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
A0A6L7MX87_9GAMM2.880e-2488.89Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
UPI00190DD1C72.900e-2497.78ribonucleotide-diphosphate reductase subunit beta ... [more]
UPI001903A8F53.010e-2497.78ribonucleotide-diphosphate reductase subunit beta ... [more]
A0A661GM43_9GAMM3.840e-2488.89Ribonucleotide-diphosphate reductase subunit beta ... [more]
A0A5M8FHC0_9GAMM5.020e-2495.56Ribonucleoside-diphosphate reductase subunit beta ... [more]
A0A846HNY3_9GAMM5.640e-2495.56Ribonucleoside-diphosphate reductase subunit beta ... [more]
A0A6N8ECA3_9GAMM6.980e-2495.56Ribonucleoside-diphosphate reductase n=1 Tax=Alloc... [more]
W9VUJ8_9GAMM7.100e-2495.56Ribonucleoside-diphosphate reductase n=1 Tax=Imhof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012348Ribonucleotide reductase-likeGENE3D1.10.620.20coord: 1..38
e-value: 7.2E-12
score: 46.9
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111909contigM-pyrifera_M_contig111909:450..587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111909.2487.1mRNA_M-pyrifera_M_contig111909.2487.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111909 450..587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111909.2487.1 ID=prot_M-pyrifera_M_contig111909.2487.1|Name=mRNA_M-pyrifera_M_contig111909.2487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
GLPEQYPGATNPFPWMSEVIDLKKEKNFFETRVTEYQTGGALSWD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012348RNR-like
IPR009078Ferritin-like_SF