prot_M-pyrifera_M_contig111843.2478.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig111843.2478.1
Unique Name	prot_M-pyrifera_M_contig111843.2478.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	158

Homology

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BLAST of mRNA_M-pyrifera_M_contig111843.2478.1 vs. uniprot
Match: A0A7C3SVQ1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3SVQ1_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 1.020e-21
Identity = 58/150 (38.67%), Postives = 89/150 (59.33%), Query Frame = 0

Query:   10 WFIPAVYYARQLVLAFSTRTIQSIAAI-EQTEDEIGNPFKQARDLAVHGDIDGAIARYRSYTERTKEARFEAAQLLEAEGRYRDALDFYIEIGDRHRDDIRAWGEAMFRRAKLLDTVFGDGDGARMLYERILDRASHTEFATLASTQLSR 158
            WFIP  YY+   V   +++ ++ I+ I ++ ED   +PF  AR LA+ GDIDGAIA YRSY     EA FE  +LL+++ R+ +A     EI + + D   AW EA + +AK+   +F   + A  LY++IL +   T F T+AS +++R
Sbjct:   82 WFIPMFYYSFFFVNVVTSQIVEQISPIGDKIEDP--SPFANARKLALMGDIDGAIALYRSYKNNQVEALFEIFRLLKSKERHEEAFQTLQEIIENYEDRTSAWIEAKYYQAKIKSAIFKKYNEAIQLYKQILRKRPKTPFHTIASAEIAR 229

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig111843.2478.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig111843.2478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A7C3SVQ1_9BACT	1.020e-21	38.67	Uncharacterized protein n=1 Tax=Candidatus Hydroge...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 45..158 e-value: 1.4E-8 score: 37.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 45..144
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..158
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig111843	contig	M-pyrifera_M_contig111843:104..577 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig111843.2478.1	mRNA_M-pyrifera_M_contig111843.2478.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig111843 104..586 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig111843.2478.1 ID=prot_M-pyrifera_M_contig111843.2478.1|Name=mRNA_M-pyrifera_M_contig111843.2478.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
MLMLYAAGLWFIPAVYYARQLVLAFSTRTIQSIAAIEQTEDEIGNPFKQA
RDLAVHGDIDGAIARYRSYTERTKEARFEAAQLLEAEGRYRDALDFYIEI
GDRHRDDIRAWGEAMFRRAKLLDTVFGDGDGARMLYERILDRASHTEFAT
LASTQLSR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf