prot_M-pyrifera_M_contig111830.2473.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111830.2473.1
Unique Nameprot_M-pyrifera_M_contig111830.2473.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
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BLAST of mRNA_M-pyrifera_M_contig111830.2473.1 vs. uniprot
Match: L7N0U5_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=L7N0U5_CIOIN)

HSP 1 Score: 68.9 bits (167), Expect = 9.990e-11
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0 
Query:   47 SILFSALALVPVGWVQVLTFIALSGFRAFHFSVQSTILAERFGFKNFGLHIGIITMFGGLLALLQFPLLVAITNS-GGDFTVTNSIILALSVLSAAFPAWYYWKRSSE 153
            +ILFS + LVPV  +Q L+F+    FR+F +   +  L   F  ++FG    I   FG ++ALLQ+PL +A+TN  GGDFT  N  +L +SV +   P   Y +R+ +
Sbjct:  364 AILFSIMVLVPVLRLQYLSFLLQVVFRSFLYGGNAAFLLTTFPSEHFGKVYSITVTFGSIIALLQYPLFLAVTNIYGGDFTAINLALLVISVATIVHPIVLYDERNCQ 471
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111830.2473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
L7N0U5_CIOIN9.990e-1138.89Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..155
e-value: 6.4E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR20772FAMILY NOT NAMEDcoord: 2..151
NoneNo IPR availablePANTHERPTHR20772:SF2PROTEIN FMP42coord: 2..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 41..72
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 10..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111830contigM-pyrifera_M_contig111830:93..557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111830.2473.1mRNA_M-pyrifera_M_contig111830.2473.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111830 93..557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111830.2473.1 ID=prot_M-pyrifera_M_contig111830.2473.1|Name=mRNA_M-pyrifera_M_contig111830.2473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
GDVAEVEQWLSILSIILPLGALWQGAVGQIIDKRGLEIAIFVLVAFSILF
SALALVPVGWVQVLTFIALSGFRAFHFSVQSTILAERFGFKNFGLHIGII
TMFGGLLALLQFPLLVAITNSGGDFTVTNSIILALSVLSAAFPAWYYWKR
SSEKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf