prot_M-pyrifera_M_contig1117.2445.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1117.2445.1
Unique Nameprot_M-pyrifera_M_contig1117.2445.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length301
Homology
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: D7FM68_ECTSI (Procaryotic DNA polymerase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM68_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 6.550e-137
Identity = 204/300 (68.00%), Postives = 242/300 (80.67%), Query Frame = 0
Query:    1 SRPAGAVSPAERIYQLAGREFEIGKPSILAKVLFDEVGVFDPEGSGSASPPSKARTGGGRVKSKSVSAKALKAILKGEDNPLKRELVQLVLDWRNAEAVPKRGGFVASGAKVADVPAWSSCLIPDHDELVVDPSAAPVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            S+ AG V  AERI+Q+AGREF+IGKPS+LAKVL+DE+ VF+P+    A     A T  GR K +SVS K L A+L+ E +P KREL++LVL W +A+AV KRGGFVA+G KV D+P+WSS LIPD DEL  DPSA+PV+L+DGHYI YRSFHGMPHLSA DGTPVGAL+GFCN +NKLV++PW +G+E R+KVVV FDT  DNFRH+L   YK  R + PE LRPQFAL+R AC+AYGL+ +EG G+E DDVIASLALEAV  GATNVTI SADKDLAQLVTRRVNMLNVYT ERLGP+E
Sbjct:   54 SKSAGGV--AERIHQIAGREFDIGKPSVLAKVLYDEMSVFNPQAGSKA-----ALTAAGRPKPRSVSVKTLSAVLEAERDPAKRELIELVLRWLDAKAVAKRGGFVAAGEKVVDIPSWSSRLIPDDDELPADPSASPVVLVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNTMNKLVVQPWAEGVERRQKVVVVFDTGDDNFRHDLSPSYKKHRTETPEALRPQFALVRKACEAYGLETIEGPGYEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEE 346          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A7S2VW30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW30_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.800e-41
Identity = 108/273 (39.56%), Postives = 154/273 (56.41%), Query Frame = 0
Query:   11 ERIYQLAGREFEIGKPSILAKVLFDEVGVFDPEGSGSASPPSKARTGGGR-VKSKSVSAKALKAILKGEDNPLKRELVQLVLDWRNAEAVPKRGGFVASGAKVADVPAWSSCLIPDHDELVVDPSAAPVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVT 282
            + IYQ+AG+EF +  P+ L  VL+   G+ +  G  +A    +A  G G  +  K +  +ALK+ +K ++   +R + +  L  +N E               A   A S+  + D+     DP    +LLID    I+R+++ MP L   DGTP GA+LGFCN++N+LV+   + G  PR  +V  FD  GDNFRH++YS YKA R   P DL PQF LIRS   AYG+  +E  G+EADDVIA+L++     G  NV + S+DKDL QLVT
Sbjct:  125 DEIYQMAGKEFNLNSPTQLGLVLY---GIKN--GGSTAKETLEAMAGAGNPLAGKVLKYRALKSSIKRQEKQEERMVERRKLAAQNEER-----------RATATPTASSTPNLKDNFTSGRDP----LLLIDASAYIFRAYYAMPPLHRSDGTPTGAVLGFCNMLNRLVMERLLRGERPRLAMV--FDAKGDNFRHKIYSEYKANRPPCPIDLVPQFPLIRSLASAYGVQQIEASGYEADDVIATLSVRGRKEG-VNVNVVSSDKDLMQLVT 374          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: B8C0P9_THAPS (53EXOc domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0P9_THAPS)

HSP 1 Score: 144 bits (362), Expect = 6.200e-38
Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 0
Query:  138 VLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            +LLID    I+RS+H +P L   DGTP GAL G C ++  L+L   + G  PR  VV+AFD  G NFRHE+Y  YKA R   PEDL PQF L+R A +A+G+  VE  G+EADDVIA+LA +A+  G  +V I S DKDL QL+T  V+M++    +R+  D+
Sbjct:    1 LLLIDASAYIFRSYHAIPPLHRSDGTPTGALHGVCRMLQNLLLSRLLKGDRPR--VVLAFDFKGPNFRHEIYPEYKANRGPCPEDLVPQFELVREAAEAFGIVQVEAEGYEADDVIATLARQALEEG-VDVDILSGDKDLMQLITPPVHMIDSTHFDRVTHDD 160          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: UPI00036D90DD (DNA polymerase I n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00036D90DD)

HSP 1 Score: 152 bits (384), Expect = 9.360e-38
Identity = 82/165 (49.70%), Postives = 109/165 (66.06%), Query Frame = 0
Query:  136 APVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            A V L+DG   I+R++H +P L+  DGTPVGA+ GFCN++ KL+    + G +    + V FD  GD FR+E+Y  YKA R   PEDL PQFALIR A +A+ L  +E  G+EADD+IA+ A +A   GA  VTI S+DKDL QLV  R+ +L+   N+R GPDE
Sbjct:   11 AHVYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLL--EDLKGADEPSHLAVIFDAKGDTFRNEIYPAYKANRPPAPEDLVPQFALIREATRAFDLPCIELEGYEADDIIATYACQARAQGA-RVTIVSSDKDLMQLVDDRITLLDTMKNKRSGPDE 172          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A355VTE2_9PROT (DNA polymerase I n=1 Tax=Holosporales bacterium TaxID=2053559 RepID=A0A355VTE2_9PROT)

HSP 1 Score: 148 bits (374), Expect = 2.110e-36
Identity = 79/167 (47.31%), Postives = 108/167 (64.67%), Query Frame = 0
Query:  134 SAAPVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            S   + LIDG   I+R++H +P L   DGTPVGA+LGFCN+I KL+    +D +       V FD+   N+RH++Y  YKA R++ PEDL PQF L R AC+A+ L  +E +G+EADD+IA+ A +AV  G  +VTI S+DKDL QLV   V M++   N  +G DE
Sbjct:   40 SGKHIYLIDGSGFIFRAYHALPPLVRGDGTPVGAVLGFCNIILKLLDANNIDNM------AVVFDSARANYRHDIYPDYKANRSETPEDLIPQFPLFREACEAFNLPQIELIGYEADDIIATYAKQAVAQG-NDVTIVSSDKDLMQLVNDNVRMMDPMKNTFIGYDE 199          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A2U2BWV8_9PROT (DNA polymerase I n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BWV8_9PROT)

HSP 1 Score: 146 bits (368), Expect = 1.270e-35
Identity = 80/163 (49.08%), Postives = 109/163 (66.87%), Query Frame = 0
Query:  138 VLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            V L+DG   I+R++H +P L+  DGTPVGA+ GFCN++ KL+    + G +    + V FD   + FR+E+Y  YKA R + PEDL PQFALIR A KA+ L  +E  G+EADD++A+ A  A   GA  VT+AS+DKDL QLV  +V ML+   N+R+GPDE
Sbjct:   13 VYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLL--EDLKGEDQPSHLAVIFDYSAETFRNEIYDQYKAHRPEPPEDLVPQFALIRDAVKAFQLPCIELEGYEADDIMATYARHAAEKGA-RVTLASSDKDLMQLVNGQVTMLDPMKNKRIGPDE 172          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: K0TBB0_THAOC (53EXOc domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBB0_THAOC)

HSP 1 Score: 144 bits (364), Expect = 2.770e-35
Identity = 84/169 (49.70%), Postives = 105/169 (62.13%), Query Frame = 0
Query:  137 PVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTR-----RVNMLNVYTNERLGPDE 300
            P+LLID    I+RS+H +P L   DGTP GAL G   ++ +L+L     G  PR  VV+ FD+ G NFRHELY  YKA R   PEDL PQFAL++ A  A+GL  +E  G+EADDVIA+LA  AV  G   V I S DKDL QL+T       +NM++    ER+G DE
Sbjct:  354 PLLLIDASAYIFRSYHALPPLHHSDGTPTGALHGMVKMLQRLLLGRLFRGERPR--VVLVFDSKGPNFRHELYPEYKANRGPCPEDLIPQFALVKEAATAFGLPQIEAEGYEADDVIATLAKIAVKEGVA-VDIMSGDKDLMQLITEPNVEPAINMVDPIRFERVGHDE 519          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A1Z5K2T3_FISSO (DNA polymerase I n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2T3_FISSO)

HSP 1 Score: 144 bits (364), Expect = 3.840e-35
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 0
Query:  134 SAAPVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLV 281
            S  P+LL+D    IYR+++ MP +   DG P GA++GFCN++N+L+L   V G++PR  +V+ FD  G  FRHELY+ YKA RA+ P DL PQF+LIR A  AYG+ ++E   +EADDVIA+LA  A   G  +V I S DKDL QL+
Sbjct:  475 SGDPLLLVDASAYIYRAYYSMPPIHRSDGMPTGAVMGFCNMLNRLILNRMVQGVQPR--IVLVFDAKGKTFRHELYNEYKAHRAEAPMDLIPQFSLIRQAGLAYGMPMIEAPNYEADDVIATLAGMAQREG-LDVHILSGDKDLMQLI 619          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A1Z5J9E3_FISSO (DNA polymerase I n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9E3_FISSO)

HSP 1 Score: 142 bits (358), Expect = 6.800e-35
Identity = 75/148 (50.68%), Postives = 100/148 (67.57%), Query Frame = 0
Query:  134 SAAPVLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLV 281
            S  P+LL+D    IYR+++ MP +   DG P GA++GFCN++N+L+L   V G +PR  +V+ FD  G  FRHELY+ YKA RA+ P DL PQF+LIR A  AYG+ ++E   +EADDVIA+LA  A   G  +V I S DKDL QL+
Sbjct:  223 SGDPLLLVDASAYIYRAYYSMPPIHRSDGMPTGAVMGFCNMLNRLILNRMVQGEQPR--IVLVFDAKGKTFRHELYNEYKAHRAEAPMDLIPQFSLIRQAGLAYGMPMIEASNYEADDVIATLAGMAQREG-LDVHILSGDKDLMQLI 367          
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Match: A0A4R3JE13_9PROT (DNA polymerase I n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JE13_9PROT)

HSP 1 Score: 143 bits (361), Expect = 1.080e-34
Identity = 82/163 (50.31%), Postives = 104/163 (63.80%), Query Frame = 0
Query:  138 VLLIDGHYIIYRSFHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTVGDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEADDVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE 300
            V LIDG   I+R+FHG+P +S PDGTPV A+ GF  ++ KLV     D I       V FD     FR+++Y  YKA RA+ PEDL PQFAL+R A +A GL  V+  GFEADD+IA+    A+   A +VTI S+DKDL QLV  RVNM++   N  +GPDE
Sbjct:    4 VFLIDGSGFIFRAFHGLPPMSRPDGTPVNAVYGFVMMLMKLVEETDADHI------AVLFDRARKTFRNDIYPDYKANRAEPPEDLIPQFALVRDATRAMGLPAVDMDGFEADDLIATYTRIALERDA-DVTIVSSDKDLMQLVGPRVNMMDAMKNRLIGPDE 159          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1117.2445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM68_ECTSI6.550e-13768.00Procaryotic DNA polymerase I n=1 Tax=Ectocarpus si... [more]
A0A7S2VW30_9STRA7.800e-4139.56Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
B8C0P9_THAPS6.200e-3849.0853EXOc domain-containing protein (Fragment) n=1 Ta... [more]
UPI00036D90DD9.360e-3849.70DNA polymerase I n=1 Tax=Woodsholea maritima TaxID... [more]
A0A355VTE2_9PROT2.110e-3647.31DNA polymerase I n=1 Tax=Holosporales bacterium Ta... [more]
A0A2U2BWV8_9PROT1.270e-3549.08DNA polymerase I n=1 Tax=Marinicauda salina TaxID=... [more]
K0TBB0_THAOC2.770e-3549.7053EXOc domain-containing protein n=1 Tax=Thalassio... [more]
A0A1Z5K2T3_FISSO3.840e-3550.68DNA polymerase I n=1 Tax=Fistulifera solaris TaxID... [more]
A0A1Z5J9E3_FISSO6.800e-3550.68DNA polymerase I n=1 Tax=Fistulifera solaris TaxID... [more]
A0A4R3JE13_9PROT1.080e-3450.31DNA polymerase I n=1 Tax=Varunaivibrio sulfuroxida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 136..301
e-value: 4.1E-12
score: 45.0
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 138..294
e-value: 1.8E-44
score: 151.4
NoneNo IPR availableGENE3D1.20.1060.10coord: 7..101
e-value: 1.4E-5
score: 27.1
NoneNo IPR availableGENE3D3.40.50.1010coord: 129..300
e-value: 2.6E-45
score: 156.0
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 133..294
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 132..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1117contigM-pyrifera_M_contig1117:5442..10654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1117.2445.1mRNA_M-pyrifera_M_contig1117.2445.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1117 5441..10654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1117.2445.1 ID=prot_M-pyrifera_M_contig1117.2445.1|Name=mRNA_M-pyrifera_M_contig1117.2445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
SRPAGAVSPAERIYQLAGREFEIGKPSILAKVLFDEVGVFDPEGSGSASP
PSKARTGGGRVKSKSVSAKALKAILKGEDNPLKRELVQLVLDWRNAEAVP
KRGGFVASGAKVADVPAWSSCLIPDHDELVVDPSAAPVLLIDGHYIIYRS
FHGMPHLSAPDGTPVGALLGFCNVINKLVLRPWVDGIEPRRKVVVAFDTV
GDNFRHELYSGYKAGRAKVPEDLRPQFALIRSACKAYGLDIVEGVGFEAD
DVIASLALEAVTAGATNVTIASADKDLAQLVTRRVNMLNVYTNERLGPDE
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0024215-3_exonuclease_N
IPR0200465-3_exonucl_a-hlix_arch_N
IPR038969FEN_bact-like
IPR029060PIN-like_dom_sf