prot_M-pyrifera_M_contig1117.2444.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1117.2444.1
Unique Nameprot_M-pyrifera_M_contig1117.2444.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: D7FM68_ECTSI (Procaryotic DNA polymerase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM68_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.250e-48
Identity = 93/142 (65.49%), Postives = 109/142 (76.76%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLASVAPFALQSGIGKGT-ERLLEFMRDNGLPDLANRTSNILGID 141
            VL+KFLAPPGRLADLL I GDKSD IVG +GYGPVKAAKVLAKH TLE AVD+IC+ ++KK  DP LV +TR    LARRLVEL T VPLDRRTG K+LASV  F L+   G+G  ERLL FMR   + +L+ RTS +LG++
Sbjct:  347 VLAKFLAPPGRLADLLAIAGDKSDGIVGAEGYGPVKAAKVLAKHETLEAAVDEICSTISKKIEDPELVAKTREQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLE---GEGAAERLLAFMRRFEMDELSLRTSRLLGVN 485          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: UPI00165E04D2 (DNA polymerase I n=1 Tax=Sphingosinithalassobacter sp. CS137 TaxID=2762748 RepID=UPI00165E04D2)

HSP 1 Score: 64.3 bits (155), Expect = 3.340e-9
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPL 90
            VL KF   PG+L ++L + GD  D++ GV G GP +AA+++ ++  +E AV     +M K  +   L+E   A A L+RRLVELS  VPL
Sbjct:  165 VLEKFGVEPGKLGEVLALMGDSVDNVPGVPGIGPKRAAELIQQYGDVE-AVLAAAPDMKKSKMRENLIEHAEA-ARLSRRLVELSCDVPL 252          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A7X9DXQ2_9DELT (DNA polymerase I n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9DXQ2_9DELT)

HSP 1 Score: 63.2 bits (152), Expect = 8.410e-9
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLASVAPFALQSGIGK 113
            V  K   PP R+ADLL + GD SD++ GV G G   AA++LA+H +LEE +      M    +   L+ +  A A L+ RLV L+ AVPL       ++    P AL++ + +
Sbjct:  165 VQEKMGVPPERIADLLALMGDSSDNVPGVSGVGEKTAARLLAEHGSLEEVLA-AAPSMKPGKLRERLMSEAEA-ARLSLRLVTLNRAVPLPLSLSDLSVRPPEPEALRAFLAE 275          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: UPI000D6DF82C (DNA polymerase I n=1 Tax=Sphingosinithalassobacter portus TaxID=2676234 RepID=UPI000D6DF82C)

HSP 1 Score: 61.6 bits (148), Expect = 2.900e-8
Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLASVAPFALQSGIGKGTERLLEFMRDNGLPDLANRTSNILGIDTGE 144
            V+ KF  PP +L ++L + GD  D++ GV G GP +AA ++ ++  +E  +     +M K  +   L+E     A L+R+LVEL+  VPL           +  FAL+   G     L  F+  +G   L NR S++      E
Sbjct:  164 VIEKFGVPPEKLGEVLALMGDSVDNVPGVPGIGPKRAADLINEYGDVESVLA-AAPDMKKSKMRDNLIEHAEM-ARLSRKLVELARDVPLPD--------PLEEFALK---GIPEPPLRAFLEHHGFKSLLNRLSSVADAPMAE 294          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A2G6JF52_9BACT (DNA polymerase I n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2G6JF52_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 2.910e-8
Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLD 91
            V+ KF  PP ++ DLL + GD SD++ GV G GP KAA++L ++ +L+ A+ D    M K  +   L+E  R  A L+R+LV + T + L+
Sbjct:  211 VIEKFGVPPEQIIDLLALMGDSSDNVPGVPGIGPKKAAQLLNEYGSLD-AILDAAEGMKKSKMRENLIE-FRDQALLSRKLVTIVTDLDLE 299          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A7V5NVP1_9BACT (DNA polymerase I (Fragment) n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7V5NVP1_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 3.810e-8
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVD---DICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLD 91
            V  KF  PPG++ DLL ++GD SD++ G+   GP  AAK++ ++  LEE +D   +I +E  K N+     +Q R    L++ LV L   VP+D
Sbjct:  162 VEDKFDVPPGKIVDLLALSGDSSDNVPGIPKIGPKTAAKLIKEYGDLEEIIDHANEITSEKIKDNITE-YADQGR----LSKELVILDKNVPVD 250          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A318KV49_9NEIS (DNA polymerase I n=1 Tax=Rivicola pingtungensis TaxID=1054498 RepID=A0A318KV49_9NEIS)

HSP 1 Score: 61.2 bits (147), Expect = 3.950e-8
Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLD 91
            V  KF  PP R+ D LT+TGDK D++ GVDG GP  AAK LA+H +L+  +    A+  K      L      H  L+R+LV +   V L 
Sbjct:  160 VQEKFGVPPERIIDFLTLTGDKVDNVPGVDGCGPKTAAKWLAEHGSLDAII--AAADSVKGKAGEKL-RAALPHLPLSRQLVTIKLDVDLS 247          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A430DPZ7_9SPHN (DNA polymerase I n=5 Tax=Sphingomonas TaxID=13687 RepID=A0A430DPZ7_9SPHN)

HSP 1 Score: 59.7 bits (143), Expect = 1.350e-7
Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEE--AVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLASVAPFALQSGIGKGTERLLEFMRDNGLPDLANRTSNI 137
            V+ KF  PP +L ++L + GD  D++ GV G GP +AA+++ ++  +E   A  D    M K  +   LVE   A A L+R+LV L+  VPL        L  +    L++           F+  +G   L NR S +
Sbjct:  164 VVEKFGVPPSQLGEVLALMGDSVDNVPGVPGIGPKRAAELITEYGDVESVLAATD---SMKKSKMRDNLVEHAEA-ARLSRKLVTLACDVPLPEPLDGLELQGIPDAPLRA-----------FLEHHGFRTLLNRLSAV 287          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A1T5JSW9_9BACT (DNA polymerase I n=1 Tax=Bacteroidales bacterium WCE2004 TaxID=1945890 RepID=A0A1T5JSW9_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.840e-7
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    6 LAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLD 91
            ++ P ++ D+L + GD SD++ GV G GPV AA++L K+ ++E     +  E+T +  +     Q   H SL++RLV + T +PLD
Sbjct:  171 ISAPAQVIDILALCGDASDNVPGVQGVGPVGAARLLGKYGSVEGIYGHL-GELTARQQEQFRAAQD--HISLSKRLVTIKTDIPLD 253          
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Match: A0A2E2ZXA6_SPHSX (DNA polymerase I n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2E2ZXA6_SPHSX)

HSP 1 Score: 58.9 bits (141), Expect = 2.510e-7
Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = 0
Query:    1 VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEAVDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLASVAPFALQSGIGKGTER--LLEFMRDNGLPDLANRTSNILGIDTGE 144
            V+ KF  PP +L ++L + GD  D++ GV G GP +AA ++ ++  +E  +     +M K  +   L+E     A L+R+LVEL+  VPL             P  L+    KG     L  F+  +G   L NR +++      E
Sbjct:  164 VIEKFGVPPEKLGEVLALMGDSVDNVPGVPGIGPKRAADLINEYGDVESVLA-AAPDMKKSKMRDNLIEHAEM-ARLSRKLVELARDVPL-------------PDPLEELELKGIPEPPLRAFLEHHGFKSLLNRLTSVADAPMAE 294          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1117.2444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM68_ECTSI8.250e-4865.49Procaryotic DNA polymerase I n=1 Tax=Ectocarpus si... [more]
UPI00165E04D23.340e-942.22DNA polymerase I n=1 Tax=Sphingosinithalassobacter... [more]
A0A7X9DXQ2_9DELT8.410e-936.28DNA polymerase I n=1 Tax=Myxococcales bacterium Ta... [more]
UPI000D6DF82C2.900e-830.56DNA polymerase I n=1 Tax=Sphingosinithalassobacter... [more]
A0A2G6JF52_9BACT2.910e-839.56DNA polymerase I n=1 Tax=Planctomycetes bacterium ... [more]
A0A7V5NVP1_9BACT3.810e-838.30DNA polymerase I (Fragment) n=1 Tax=Candidatus Clo... [more]
A0A318KV49_9NEIS3.950e-840.66DNA polymerase I n=1 Tax=Rivicola pingtungensis Ta... [more]
A0A430DPZ7_9SPHN1.350e-730.94DNA polymerase I n=5 Tax=Sphingomonas TaxID=13687 ... [more]
A0A1T5JSW9_9BACT1.840e-736.05DNA polymerase I n=1 Tax=Bacteroidales bacterium W... [more]
A0A2E2ZXA6_SPHSX2.510e-729.45DNA polymerase I n=2 Tax=Sphingomonadaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 8..93
e-value: 1.4E-15
score: 57.6
NoneNo IPR availableGENE3D1.10.150.20coord: 9..99
e-value: 2.2E-13
score: 52.2
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 7..93
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 8..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1117contigM-pyrifera_M_contig1117:3401..5005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1117.2444.1mRNA_M-pyrifera_M_contig1117.2444.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1117 3401..5005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1117.2444.1 ID=prot_M-pyrifera_M_contig1117.2444.1|Name=mRNA_M-pyrifera_M_contig1117.2444.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
VLSKFLAPPGRLADLLTITGDKSDDIVGVDGYGPVKAAKVLAKHATLEEA
VDDICAEMTKKNVDPALVEQTRAHASLARRLVELSTAVPLDRRTGAKTLA
SVAPFALQSGIGKGTERLLEFMRDNGLPDLANRTSNILGIDTGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020045DNA_polI_H3TH
IPR038969FEN_bact-like
IPR0362795-3_exonuclease_C_sf