prot_M-pyrifera_M_contig111631.2420.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111631.2420.1
Unique Nameprot_M-pyrifera_M_contig111631.2420.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length195
Homology
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A7S4MGI3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MGI3_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 5.610e-55
Identity = 101/195 (51.79%), Postives = 139/195 (71.28%), Query Frame = 0
Query:    1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGG-VHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLEC 194
            +EL P  KEKPDVWI+P  SR+LQVKAAQ+VP+EKF + FTLRFPRVQK+RLDK W D++D    L+ + K+ G+ SR+            KKKRK V ++  +TV   FQ+A T  + + +++F  KE+C++ G   H KA+LERIA +HGA+RVQYP+D+T  VV +K TL+V N++E+G FDIVKP+W+L C
Sbjct:   28 IELMPPCKEKPDVWIDPKNSRILQVKAAQIVPTEKFVTRFTLRFPRVQKLRLDKNWYDAMDSKE-LQQITKH-GRTSRR--ISEIDKEQPPKKKRKTVNTRRSLTVLQQFQQADTKDLSIIAALFQNKEICILSGDDSHSKADLERIAFQHGASRVQYPTDATDIVVAEKKTLRVSNIIETGGFDIVKPIWILTC 218          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI000C6DBC4A (DNA ligase 4-like isoform X1 n=4 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DBC4A)

HSP 1 Score: 152 bits (384), Expect = 3.130e-39
Identity = 88/196 (44.90%), Postives = 126/196 (64.29%), Query Frame = 0
Query:    3 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQ--TKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            LAPGHKEKPDVWI+P  S VLQVKAA++  S++FK+G +LRFPRV+KIR DK+W+  L  +  LE + K  G     RY     D     + KKRKV+++    TVA  FQ A  + ++V+S +F  KE CV+ G   H K  LE++  ++G    Q P  +T+CV+ DK+TLK KN++   ++++VK  WLL+C+
Sbjct:  531 LAPGHKEKPDVWIKPENSAVLQVKAAEITQSDQFKTGCSLRFPRVEKIRYDKSWNQCLTLSE-LENLRKEGGGKLAGRYCTITTDQNYEISPKKRKVILTSVKPTVAPHFQPADISDIKVKSHMFEEKEFCVINGPPSHSKHTLEKLIAEYGGNITQNPGMNTFCVIVDKVTLKAKNIIAKKQYNVVKVTWLLKCI 725          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI001CF5AFC9 (DNA ligase 4-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5AFC9)

HSP 1 Score: 152 bits (383), Expect = 4.300e-39
Identity = 84/195 (43.08%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    3 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVT-VAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            LAPG+KEKPDVWIEP+KS+++QVKAA+++ S+KFK+G TLRFPRV+ IR DK W + L    + +L +  +G+++ + +  A       +K+RK V     VT VA  F+ A  + V+  S +F GKE C++ G   H KA+LE+   ++G +  Q PS  TYCV+ ++I ++VKN++   KFD+V+  WL++C+
Sbjct:  543 LAPGYKEKPDVWIEPTKSKIVQVKAAEIIASDKFKTGVTLRFPRVEAIRKDKMWYECLSSTELEKLKSMAEGKLTYQ-HTNAEHSHEPARKRRKGVTRNERVTSVAEHFKPADLSSVEQVSQLFEGKEFCIVTGPASHPKAKLEKKVAENGGSCTQNPSAETYCVIAERINVRVKNIISQKKFDVVQASWLIQCL 736          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI001E1D563F (LOW QUALITY PROTEIN: DNA ligase 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D563F)

HSP 1 Score: 152 bits (383), Expect = 4.300e-39
Identity = 86/196 (43.88%), Postives = 123/196 (62.76%), Query Frame = 0
Query:    1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGVH-GKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            +ELA G KEKPD WIEPSKS ++Q+KAA+++ S++F++GFTLRFPRV+K R DK W D +    V +L  K  G+++   Y +   +    KKKRK+V      T+   F+ A T+ VQ  S +  G+E+CV+ G     K ELE+   + G T VQ P   TYCVV +KI  +V N+++S  +DIVK  WL+ C+
Sbjct:  540 IELASGFKEKPDAWIEPSKSAIVQIKAAEIIDSDRFRTGFTLRFPRVEKFRDDKEWYDCMTVEEVEQLKQKSGGKLTGG-YVELGEEQEPAKKKRKIVSRAVRPTLGSQFRAADTSSVQQVSKLLEGREICVINGPSSCSKQELEKKIVECGGTVVQNPGIDTYCVVVEKIVFRVNNMIKSNHYDIVKAEWLIRCL 734          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6P8J0X6_ACTTE (DNA ligase 4 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J0X6_ACTTE)

HSP 1 Score: 150 bits (378), Expect = 1.940e-38
Identity = 81/197 (41.12%), Postives = 127/197 (64.47%), Query Frame = 0
Query:    1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVS-KAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            + LAPG KEKPDVWIEPSKS+++Q+KAA+++ S+++K+G TLRFPR++ IR DK W + LD   + +L    +G+++ + +    G    T+KKR+V    +   TVA  F+ A  + V   S +F GKE C++ G     KA+LE+   +HG T  Q P   TYCV+ +++ L+V N+++  K D+VK  WL++C+
Sbjct:  487 IALAPGFKEKPDVWIEPSKSKIVQIKAAEIIASDRYKTGSTLRFPRLECIRDDKHWYECLDLKELEKLRTMAEGKLTYQ-HTDMDGTSEPTRKKRRVAARVEQPRTVAAHFRPADVSSVTEVSKLFAGKEFCIINGPTSEPKAQLEKKVVEHGGTFTQNPGPETYCVIAERVNLRVNNIIKDAKHDVVKASWLIDCL 682          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6B2KXJ9_9EUKA (DNA ligase 4 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXJ9_9EUKA)

HSP 1 Score: 150 bits (378), Expect = 1.960e-38
Identity = 78/194 (40.21%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    3 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGG-GVHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            LA   K+KP++WIEP  S+VL+VKAAQ+V S+K+K+G+TLRFPRV KIR DK +   +  + ++ +   ++G+++++ + +   +  + K+K+K ++ K    VA  F+ A T+ ++VE  +F   E CVM G     K ELE + H++G +  QYP+  TY V+  K TLKVKN+ + G  DI+K  W+L+C+
Sbjct:  473 LADQCKDKPNIWIEPKFSKVLEVKAAQIVTSDKYKAGYTLRFPRVVKIRNDKNYMQCMTMDELVSMSKIFEGRLTKRNFNEKEKNENEVKEKKKRIIPKKLYAVASNFKAADTSNIKVEREIFGQMEFCVMNGDNDFSKEELEILIHQYGGSTTQYPTKDTYAVIAAKETLKVKNIQQKGDIDIIKTKWILDCI 666          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI0006B10C16 (DNA ligase 4-like isoform X1 n=4 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B10C16)

HSP 1 Score: 150 bits (378), Expect = 2.030e-38
Identity = 80/196 (40.82%), Postives = 130/196 (66.33%), Query Frame = 0
Query:    3 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYA-QAAGDGAQTKKKRKVVVSKAGV-TVAGAFQKASTAGVQVESSVFCGKELCVMGG-GVHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            LA GHKEKPD+W+EPSKS ++QVKA +++ S++FK+G TLRFPRV+K+R DK W   +  + + +L  + +G+++ +      +G+   + KKR+V      + T+A  FQ A  +GV+  S++F GK++CV+ G   H K  LE++  ++G + VQ P   T+CV+T K+ L+VKN++   ++D+V+  WLL CV
Sbjct:  537 LASGHKEKPDLWVEPSKSYIVQVKATEIIKSDRFKTGCTLRFPRVEKVRYDKPWFQCMTLSELEDLKQQAQGKLAFQHLVGNESGETEPSPKKRRVPQRTDRICTIAPQFQPADVSGVKPVSAIFSGKQMCVVIGLPEHSKQNLEKLIVEYGGSVVQNPDVDTFCVITSKVNLRVKNIISMNRYDVVRAEWLLRCV 732          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6S7GCV9_PARCT (DNA ligase 4 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GCV9_PARCT)

HSP 1 Score: 146 bits (369), Expect = 5.430e-38
Identity = 81/196 (41.33%), Postives = 129/196 (65.82%), Query Frame = 0
Query:    1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGVH-GKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            +EL  G+KEKPDVWIEPSKS+++Q+KAA++VPS+ +K+G TLRFPR++KIR DK+W + LD N +  L +  KG++S + +   + + A  K+KR V   +  +TVA  F  A  + V+ +S +F GKE  ++ G    GK ++E+   ++G + VQ P   T+CV+  K  ++V+N+++    D+V   WLLEC+
Sbjct:  159 IELPHGYKEKPDVWIEPSKSKIVQIKAAEIVPSDNYKAGQTLRFPRLEKIRDDKSWYECLDLNELERLRSIAKGKLSYQ-HTSTSYEPAPKKRKRVVTRVEKPLTVAKHFAAADASTVEKKSKIFEGKEFYIVNGPPECGKVQIEKNVMENGGSIVQNPGKETFCVIAHKANVRVQNIIKQATCDVVHAFWLLECL 353          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: D3B9H0_POLPP (DNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9H0_POLPP)

HSP 1 Score: 148 bits (373), Expect = 9.920e-38
Identity = 90/191 (47.12%), Postives = 124/191 (64.92%), Query Frame = 0
Query:    9 EKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAG--VTVAGAFQKASTAGVQVESSVFCGKELCVMGGG-VHGKAELERIAHKHGATRVQYPSDST-YCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            E+PDV+I+P+ S VLQ+KAAQ+V +EK+K GFTLRFPRV KIR DK WS+ LD+ GV+ L  +Y+G+ ++++      DG  TKK+R     K    + V   F+   T GV  +S +F G E CV+ G   H KA LE +  ++G T+VQYPS  T Y V + K  LK++NL+ SG FDIV   WLL+C+
Sbjct:  656 ERPDVYIDPTASFVLQIKAAQIVITEKYKVGFTLRFPRVVKIRDDKQWSECLDEAGVISLANEYEGRYAKRKIE--IQDGKSTKKRRTSTTKKPKKKIGVLQCFEDTDTTGVVKQSGLFEGLEFCVVKGDRQHSKAMLEIVIVENGGTKVQYPSKKTNYVVSSMKEVLKIQNLISSGSFDIVHFQWLLDCI 844          
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI000719A52C (DNA ligase 4-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A52C)

HSP 1 Score: 147 bits (372), Expect = 1.300e-37
Identity = 76/190 (40.00%), Postives = 124/190 (65.26%), Query Frame = 0
Query:    9 EKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTK--KKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 195
            EKPD+W+EPS+  ++Q+KA ++  S+K+ +G TLRFPRV+ +R DKAW D +    + EL    +G+++ +  A    D A+    KKR++  ++  ++V   FQ A   G++  S +  G+E+CV+ G   H K  LE++A +HGAT VQ+P + T+CVVTDK+ L+V+N++E   +D+V+  WL+ CV
Sbjct:  546 EKPDLWLEPSQGYIVQIKATEITKSDKYGTGCTLRFPRVEHVRYDKAWYDCMTTTELEELRKNAEGKLASRHVALREDDDAEMPAVKKRRIYKAEQTISVPAQFQPADVTGLKKLSELLQGREICVVNGPPSHSKQTLEKMAVEHGATIVQHPGERTWCVVTDKVNLRVRNMIEHDDYDVVRASWLIRCV 735          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MGI3_9EUKA5.610e-5551.79Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
UPI000C6DBC4A3.130e-3944.90DNA ligase 4-like isoform X1 n=4 Tax=Centruroides ... [more]
UPI001CF5AFC94.300e-3943.08DNA ligase 4-like n=1 Tax=Acropora millepora TaxID... [more]
UPI001E1D563F4.300e-3943.88LOW QUALITY PROTEIN: DNA ligase 4-like n=1 Tax=Mer... [more]
A0A6P8J0X6_ACTTE1.940e-3841.12DNA ligase 4 n=1 Tax=Actinia tenebrosa TaxID=6105 ... [more]
A0A6B2KXJ9_9EUKA1.960e-3840.21DNA ligase 4 n=1 Tax=Arcella intermedia TaxID=1963... [more]
UPI0006B10C162.030e-3840.82DNA ligase 4-like isoform X1 n=4 Tax=Limulus polyp... [more]
A0A6S7GCV9_PARCT5.430e-3841.33DNA ligase 4 n=1 Tax=Paramuricea clavata TaxID=317... [more]
D3B9H0_POLPP9.920e-3847.12DNA ligase n=1 Tax=Polysphondylium pallidum (strai... [more]
UPI000719A52C1.300e-3740.00DNA ligase 4-like n=1 Tax=Priapulus caudatus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 122..195
e-value: 1.6E-4
score: 31.0
IPR001357BRCT domainPFAMPF00533BRCTcoord: 140..195
e-value: 8.5E-7
score: 29.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 120..195
score: 11.587
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 6..54
e-value: 3.1E-8
score: 34.1
NoneNo IPR availableGENE3D2.40.50.140coord: 2..75
e-value: 4.4E-19
score: 71.1
NoneNo IPR availablePANTHERPTHR45997FAMILY NOT NAMEDcoord: 3..195
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 122..195
e-value: 2.4E-17
score: 64.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 119..195
IPR029710DNA ligase 4PANTHERPTHR45997:SF1DNA LIGASE 4coord: 3..195
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 7..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111631contigM-pyrifera_M_contig111631:5..589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111631.2420.1mRNA_M-pyrifera_M_contig111631.2420.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111631 5..589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111631.2420.1 ID=prot_M-pyrifera_M_contig111631.2420.1|Name=mRNA_M-pyrifera_M_contig111631.2420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKI
RLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVS
KAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGVHGKAELERIAHKH
GATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR012309DNA_ligase_ATP-dep_C
IPR036420BRCT_dom_sf
IPR029710LIG4
IPR012340NA-bd_OB-fold