prot_M-pyrifera_M_contig11158.2407.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11158.2407.1
Unique Nameprot_M-pyrifera_M_contig11158.2407.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length356
Homology
BLAST of mRNA_M-pyrifera_M_contig11158.2407.1 vs. uniprot
Match: D8LBK3_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK3_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 9.670e-135
Identity = 242/353 (68.56%), Postives = 266/353 (75.35%), Query Frame = 0
Query:    1 MPAGRTAAVLTG-VHQPGA---GIPAAPPIPLGAGYASAGYPS-PAAGXXXXXXXXXXXXXXXLPPGTVVPQGRILPPPMPAAMMSQLAGLPXXXXXXPGGTALATPAPTKVLERPANGDHVQFPTKVAYFEGAEDVPGEKEKGVLRLKNGQMAVVYKTDDPHWWLGKVGDEVGWIASQTLQEVDPKAQGRQENAPAEDSNPRTWASKKKARLCCCWELDMEKTDFGMTNATTFDHHGSKITAFFIQAISLLACFFFFGRQVSGVKKNVKEEGDIWVVAKTLKAFNRLRVAWEEDYGTTSIPVEPPPARWADCSETDWSLVKGAALRKFLEEVKQWPNLKHSQDLKHFLTTDR 348
            MPA R++  L G + Q  A   G+PAAPP+P G GYA+ GYPS PA G  XXXXXXXXXXXXXLPPGTV+PQ R                  XXXXXX      A   P KVLERPANG +V FP KV+YFEGAED+PG+KEKG+LRLK+GQM VVYKTDDPHWWLGKVGD+VGW+ S  LQEVDPKA GRQ++ P  D NPRTW SKKK       ELDMEKTDF MTNATTF+HH +KITAFFIQ              VSGVKK+VKE+GDIWVVAKTLKAFNRLRVAWEEDYGT+SIPVEPPPARW DCSE+DW  +KGAALR FLEEVKQWPNLKHSQDLKHFLTTDR
Sbjct:    1 MPANRSSGTLGGGLGQQSAALAGMPAAPPMPPGMGYANNGYPSAPAGGPAXXXXXXXXXXXXXLPPGTVIPQNRPXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAPVVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDINPRTWGSKKKDNSMSAGELDMEKTDFSMTNATTFEHHNAKITAFFIQ--------------VSGVKKSVKEQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIPVEPPPARWVDCSESDWKDLKGAALRSFLEEVKQWPNLKHSQDLKHFLTTDR 339          
BLAST of mRNA_M-pyrifera_M_contig11158.2407.1 vs. uniprot
Match: A0A836CBE7_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE7_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.590e-59
Identity = 124/309 (40.13%), Postives = 166/309 (53.72%), Query Frame = 0
Query:   97 TALATPAPTKVLERPANGDHVQFPTKVAYFEGAEDVPGEKEKGVLRLKNGQMAVVYKTDDPHWWLGKVGDEVGWIASQTLQEVDPKAQGRQ--------------ENAPAEDSNP------------------------------------RTWASKKKARLCCCWELDMEKTDFGMTNATTFDHHGSKITAFFIQAISLLACFFFFGRQVSGVKKNVK--EEGDIWVVAKTLKAFNRLRVAWEEDYGTTSIPVEPPPARWADCSETDWSLVKGAALRKFLEEVKQWPNLKHSQDLKHFLTTDRRASDG 353
            T +A P+ T    +  +G  V+FPTKV YFE  ED+ G K +G LRLK   +  ++K +D  WWLGK GDEVGW+ +  +  V   ++GR+              ++A A+ S                                      R W +K +  +    E+DME +DF +  A TF+H GS++TAFF+Q              VSGV+K  +    GDIW+VAKTLKAFNRLRVAWEED+G  ++PVEPPPARW  C+   W  ++ AALR  LEEVK+   L+ SQDL+HFLTTDR A  G
Sbjct:   21 TPIAAPS-TPDPRQAGSGPSVKFPTKVGYFEATEDIAGSKPEGRLRLKRNAVVAIFKAEDKDWWLGKAGDEVGWVPANKIILVTDSSRGRRPTGYLPKNEGSGKCDHAAADASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDWEAKTEHYMTA-GEIDMEASDFTLVQAKTFEHCGSRVTAFFVQ--------------VSGVRKGAEGLNRGDIWIVAKTLKAFNRLRVAWEEDFGANTVPVEPPPARWDGCAPDGWDALRLAALRALLEEVKRRGALRASQDLRHFLTTDRVALAG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11158.2407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBK3_ECTSI9.670e-13568.56SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CBE7_9STRA4.590e-5940.13SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 209..352
e-value: 5.0E-7
score: 31.4
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 231..347
NoneNo IPR availableGENE3D2.30.30.40coord: 126..201
e-value: 7.5E-8
score: 34.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..355
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..253
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 138..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11158contigM-pyrifera_M_contig11158:3314..9571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11158.2407.1mRNA_M-pyrifera_M_contig11158.2407.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11158 3314..9571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11158.2407.1 ID=prot_M-pyrifera_M_contig11158.2407.1|Name=mRNA_M-pyrifera_M_contig11158.2407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=356bp
MPAGRTAAVLTGVHQPGAGIPAAPPIPLGAGYASAGYPSPAAGGATAAGG
GLPPPPPPLPPGTVVPQGRILPPPMPAAMMSQLAGLPPPAGAVPGGTALA
TPAPTKVLERPANGDHVQFPTKVAYFEGAEDVPGEKEKGVLRLKNGQMAV
VYKTDDPHWWLGKVGDEVGWIASQTLQEVDPKAQGRQENAPAEDSNPRTW
ASKKKARLCCCWELDMEKTDFGMTNATTFDHHGSKITAFFIQAISLLACF
FFFGRQVSGVKKNVKEEGDIWVVAKTLKAFNRLRVAWEEDYGTTSIPVEP
PPARWADCSETDWSLVKGAALRKFLEEVKQWPNLKHSQDLKHFLTTDRRA
SDGRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR036028SH3-like_dom_sf