prot_M-pyrifera_M_contig111524.2397.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111524.2397.1
Unique Nameprot_M-pyrifera_M_contig111524.2397.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length191
Homology
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A059LNB2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LNB2_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 8.480e-14
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 0
Query:   27 GRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAH 175
            GR+  +L GH+G+V G++                        LS S DR+I VW L  G C R I  PS  +AV    D  L AS H DGT+R +DLR+GK   E   LH+  A+  +   G+    +LT+GRD+++  +  +T    H
Sbjct:    2 GRLAASLTGHTGRVGGVAASPLEAG---------------VALSASADRTIKVWGLEKGFCARTILCPSTCHAVGFVRDATLIASGHWDGTLRFWDLRSGKGAHEIAGLHAGQATVASSFSGN---TVLTSGRDNLLRVVDTRTFEVMH 132          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A2P6TMB6_CHLSO (Autophagy-related 16 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMB6_CHLSO)

HSP 1 Score: 75.9 bits (185), Expect = 1.200e-12
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 0
Query:   69 LSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAHAHSFSHPALHIPFAWS 191
            +SC ++R+I VW L  G   R++  PS+ N++A + DG L AS H DGT+R +DLRTG+   E   LHS      +   G   A +LT G+D+++  +  +     H  + S P+  +  AW+
Sbjct:  557 VSCGSERAIKVWGLTDGLHRRSMMCPSICNSLAITADGSLVASGHFDGTLRFWDLRTGRVAHEVAGLHSPHGGITSVDTGSSGALVLTCGKDNLLRCVDVRRFEVRH--TLSAPSFSVGGAWT 677          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A1X7VWS1_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VWS1_AMPQE)

HSP 1 Score: 69.7 bits (169), Expect = 1.110e-10
Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = 0
Query:    6 SHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRT-PSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAP-----ASSVAFSVGDGSARLLTAGRD 160
            S   +   G +  I +W+ E    V    GH  +V G+S    ++ S                 SC  DR +C+WD+RSGKC+R I    S +NAV     G   A+A  DGTIRLFD +  +++     L++ P     ASS+ FS    S R+L AG D
Sbjct:  168 SDQQILTAGANTKIALWDMERPDPVCEFVGHKSEVMGVSLMQQNSCS--------------VFASCGNDRCVCIWDIRSGKCIRRIDDYSSELNAVEFYSTGEAVATAATDGTIRLFDFKADQEI----MLYAKPTILLAASSLDFSK---SGRILFAGYD 307          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6A6MQF4_HEVBR (ATG16 domain-containing protein n=6 Tax=Crotonoideae TaxID=235631 RepID=A0A6A6MQF4_HEVBR)

HSP 1 Score: 69.3 bits (168), Expect = 1.990e-10
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 0
Query:   12 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXT---------------------------LLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 171
            +GG DR+I++W+  TG ++RTL G  G V  LS    + S  XXXXXXXXXXXXX                            ++S + DR+I VWDL+ G C   I   S  NA+  S DG+   S H DG +RL+D+ TGK ++E    HS   +S+  S       +LT+GRD++ +    ++L
Sbjct:  262 SGGQDRSIKMWDTNTGSLIRTLYGCLGSVLDLSLTHDNRSXXXXXXXXXXXXXXXXXXXXXXXXXXHIDKVCAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCTSTIVFHSNCNALCFSTDGMTICSGHVDGNLRLWDIHTGKLLSEV-AAHSLAITSICLSKNGNV--VLTSGRDNLHNLFDMRSL 445          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A7S3E560_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E560_9CHLO)

HSP 1 Score: 67.8 bits (164), Expect = 2.000e-10
Identity = 51/154 (33.12%), Postives = 70/154 (45.45%), Query Frame = 0
Query:   10 VAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVI 163
            V A G D  +R+W  E+GR   TL GH  KV+GLSF S  +                  +S   DR           CV+ I   S    V+ S +G    S H DG++R++D RTG       +LH++  SSV  S       L+TAG+D+ I
Sbjct:    4 VVASGADGALRMWGVESGRCKHTLTGHRDKVHGLSFASSDSKK---------------CVSGGQDRXXXXXXXXXXYCVQTIACGSTCFGVSMSTNGSFVYSGHFDGSVRIWDFRTGSLEKNLPQLHTSQISSVVTSP-HSDRYLVTAGKDNTI 141          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6A6K653_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K653_HEVBR)

HSP 1 Score: 69.3 bits (168), Expect = 2.170e-10
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 0
Query:   12 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXT---------------------------LLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 171
            +GG DR+I++W+  TG ++RTL G  G V  LS    + S  XXXXXXXXXXXXX                            ++S + DR+I VWDL+ G C   I   S  NA+  S DG+   S H DG +RL+D+ TGK ++E    HS   +S+  S       +LT+GRD++ +    ++L
Sbjct:  492 SGGQDRSIKMWDTNTGSLIRTLYGCLGSVLDLSLTHDNRSXXXXXXXXXXXXXXXXXXXXXXXXXXHIDKVCAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCTSTIVFHSNCNALCFSTDGMTICSGHVDGNLRLWDIHTGKLLSEV-AAHSLAITSICLSKNGNV--VLTSGRDNLHNLFDMRSL 675          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A834GG99_RHOSS (ATG16 domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GG99_RHOSS)

HSP 1 Score: 66.2 bits (160), Expect = 2.270e-9
Identity = 52/193 (26.94%), Postives = 87/193 (45.08%), Query Frame = 0
Query:    6 SHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTS---------------------------SSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 171
            S   +A+GG D+ I++W+ +TG + RTL G  G +  L+  + +                                             ++S + DR+I VWDL  GKC+      S  +A+  S DG    S H DG++RL++++TGK ++E    HS   +SV+ S       +LT+GRD + +    ++L
Sbjct:  241 SSGALASGGQDQTIKIWDTDTGSLRRTLCGCLGSILDLAITNDNXXXXXXXXXXXXXXXXXXXXXXXXXXKGHKDKVCAVDTSKVSRFHVVSAAYDRTIKVWDLHKGKCINTTIFHSNCSAICFSIDGQTICSGHVDGSLRLWNMQTGKLLSEV-AAHSLAVTSVSLSRSGNV--ILTSGRDGLHNLFDIRSL 430          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6P6X992_COFAR (autophagy-related protein 16-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6X992_COFAR)

HSP 1 Score: 66.2 bits (160), Expect = 2.360e-9
Identity = 56/187 (29.95%), Postives = 83/187 (44.39%), Query Frame = 0
Query:   12 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFP-------SFSTSSSXXXXXXXXXXXXXTL--------------------LSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 171
            +GG DR++++W+  TG +VRT  G  G V  LS         + S S +             TL                    +S + DR+I VWDL+ G C+  I  PS  NA+  S DG    S H DG        TGK ++E    HS   +S++ S    +  +LT+GRD++ +    +TL
Sbjct:  320 SGGQDRDVKMWDTNTGALVRTFEGCVGSVLDLSITPDNRTIIAASGSKNLVVWDASSARTRHTLTGHMEKVVAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCINTILFPSNCNALTFSIDGQTICSGHVDGNXXXXXXXTGKLLSEV-AAHSLAVTSLSLSRNGNT--ILTSGRDNLHNLFDMRTL 503          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: L8GZR3_ACACA (Autophagy related 16 like 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZR3_ACACA)

HSP 1 Score: 65.9 bits (159), Expect = 3.160e-9
Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query:   23 NRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGV-LAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFS 146
            N    ++  TL GH GKV G +F S                    +++ S DR++ VWDL  G CVR +   S  NAVA  G+   +  SAH D  +RL+DL+T   VAE   + S  A+S+++S
Sbjct:  350 NLSNAKIKHTLTGHVGKVMGATFVSAEK-----------------IITGSQDRTVKVWDLGKGYCVRTVFCYSPCNAVAVVGESTRMLCSAHADRRVRLWDLKTADPVAEIQDVQSKQATSISWS 457          
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: G0M842_CAEBE (CBN-ATG-16.1 protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0M842_CAEBE)

HSP 1 Score: 63.2 bits (152), Expect = 2.610e-8
Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 0
Query:   12 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAAS--GDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAHAHS 178
            A   D+N+R+WN +T R++ TL+GHS +V  + F    ++                 +S S DR I VWDL++ +C R++   S VN +A +  G   L AS H D  +R +D R+   V    K         +  V      LL + RD  I  +  +     H +S
Sbjct:  300 ASSNDKNVRLWNLDTSRLMSTLSGHSDQVTCVKFYQSHSA-----------------VSGSADRVIKVWDLQNQRCSRSLFPASKVNDIATNMGGSPSLFASGHFDKKLRFYDARSSDPV----KTVDMNGRITSLDVTMSGCELLISTRDDTITMMDLRNFQTVHCYS 447          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059LNB2_9CHLO8.480e-1434.23Uncharacterized protein (Fragment) n=1 Tax=Helicos... [more]
A0A2P6TMB6_CHLSO1.200e-1234.96Autophagy-related 16 n=1 Tax=Chlorella sorokiniana... [more]
A0A1X7VWS1_AMPQE1.110e-1033.54Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A6A6MQF4_HEVBR1.990e-1036.36ATG16 domain-containing protein n=6 Tax=Crotonoide... [more]
A0A7S3E560_9CHLO2.000e-1033.12Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A6A6K653_HEVBR2.170e-1036.36Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A834GG99_RHOSS2.270e-926.94ATG16 domain-containing protein n=1 Tax=Rhododendr... [more]
A0A6P6X992_COFAR2.360e-929.95autophagy-related protein 16-like n=4 Tax=Coffea T... [more]
L8GZR3_ACACA3.160e-935.20Autophagy related 16 like 2, putative n=1 Tax=Acan... [more]
G0M842_CAEBE2.610e-828.99CBN-ATG-16.1 protein n=1 Tax=Caenorhabditis brenne... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 84..122
e-value: 5.0E-4
score: 29.4
coord: 125..167
e-value: 9.0
score: 11.0
coord: 26..81
e-value: 1.3E-6
score: 38.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 85..122
e-value: 0.0023
score: 18.7
coord: 8..23
e-value: 0.12
score: 13.3
coord: 28..81
e-value: 0.0016
score: 19.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 49..90
score: 10.107
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..32
score: 10.709
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..131
score: 8.67
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..92
e-value: 1.2E-20
score: 76.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 93..187
e-value: 1.2E-14
score: 56.6
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 57..164
NoneNo IPR availablePANTHERPTHR44156:SF11F-BOX AND WD REPEAT DOMAIN-CONTAINING 9coord: 2..106
coord: 57..164
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 2..106
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 68..82
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..176
score: 16.586
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111524contigM-pyrifera_M_contig111524:5..577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111524.2397.1mRNA_M-pyrifera_M_contig111524.2397.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111524 5..586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111524.2397.1 ID=prot_M-pyrifera_M_contig111524.2397.1|Name=mRNA_M-pyrifera_M_contig111524.2397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
MSVALSHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFST
SSSSSAASASTTASSSTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAV
AASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDG
SARLLTAGRDSVIHQLSAKTLTPAHAHSFSHPALHIPFAWS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf