prot_M-pyrifera_M_contig111456.2378.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111456.2378.1
Unique Nameprot_M-pyrifera_M_contig111456.2378.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S1CAZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAZ4_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.210e-8
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 0
Query:    3 HFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEA-QCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQARM---VAASSWSPLRVGDSFETMQRKMLRFD 115
            H     A SCC + VC  C  + L G A     + ++ + S  +A  A  CPHC   P  L P     + R Y ++  + A +H  RM   VA    SPL+  DS+E +QRKMLRF+
Sbjct:   99 HLKEIHATSCCGNYVCASCGVQFLRGRAGL--PADLIDIPSHPIADAAVPCPHCNSSPWALAPVALDASARVYDDSGDAIARKHSQRMEQLVAERGHSPLKATDSYEALQRKMLRFE 213          
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S4J7V2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J7V2_GUITH)

HSP 1 Score: 58.2 bits (139), Expect = 9.110e-8
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   12 CCAHCVCLECANELLSGT-AVRCDTSTVLRLDSAAVAHEAQCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQ--ARM--VAASSWSPLRVGDSFETMQRKMLRFD 115
            CC+H +C +CA E+L    A R D       D + +  E  CP+C ++ LRL   +    VR Y ++P      H+  ARM  + +S+ SPLRVGD +  M +KML FD
Sbjct:   85 CCSHHICQDCAREMLDRIPAFRAD------YDQSKIEREISCPYCGQENLRLSTVSKETNVRSYDDSP-----MHELNARMLEIQSSTLSPLRVGDDYNAMIKKMLTFD 182          
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S1TVT2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVT2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.700e-7
Identity = 34/115 (29.57%), Postives = 55/115 (47.83%), Query Frame = 0
Query:    1 MCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAQCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQARMVAASSWSPLRVGDSFETMQRKMLRFD 115
            MCH      ASCC H +C +C +++L    +       +  D   +  +  CPHCM+  L L    +   VR Y +     A+   A   A    SP+++GDSF+ ++RKM  ++
Sbjct:  134 MCHHKKILEASCCKHYMCHQCTHDMLCAKGM----DAAIHFDPGNLPVQMDCPHCMQPNLALNVVAEGNQVRTYFDEEEGEASTSTA---AKGPESPIKIGDSFDAIRRKMFTYE 241          
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S2FWN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWN0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-5
Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 0
Query:    4 FSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAQCPHCM--RKPLRLIPATDAGAVRRYSETPASAAA------RHQARMVAASSWSPLRVGDSFETMQRKMLRFD 115
            F A FA +CC +  C EC    LSG     D    L    A++     CPHC   R  L+L P +     R Y + P + A        +   +    + SPL+VGDS+E + RKML+FD
Sbjct:  113 FKATFATTCCGNYCCSECTMAYLSGREGLADP---LHRLPASLPGGVPCPHCATDRPGLQLRPVSVTAEARAYEDEPVAVAVVGGSGVGNTPSVRREDAPSPLKVGDSYEALMRKMLKFD 229          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S1CAZ4_9STRA4.210e-835.90Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4J7V2_GUITH9.110e-837.61Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1TVT2_9STRA7.700e-729.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2FWN0_9STRA1.200e-534.17Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..115
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111456contigM-pyrifera_M_contig111456:32..446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111456.2378.1mRNA_M-pyrifera_M_contig111456.2378.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111456 32..476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111456.2378.1 ID=prot_M-pyrifera_M_contig111456.2378.1|Name=mRNA_M-pyrifera_M_contig111456.2378.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
MCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEA
QCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQARMVAASSWSPLRV
GDSFETMQRKMLRFD
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