prot_M-pyrifera_M_contig111225.2347.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111225.2347.1
Unique Nameprot_M-pyrifera_M_contig111225.2347.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: A0A517T9Y2_9PLAN (Cadherin domain protein n=2 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517T9Y2_9PLAN)

HSP 1 Score: 64.3 bits (155), Expect = 1.270e-9
Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0
Query:    6 SGLDAHHIVPG----KVKRAEASRKLLERYQVDINDAVNGVPLVGGKGAAKDVLPRHHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELEVIAKEILDGTF 111
            SG  AHHIV      K K A   R+LL+ +Q+DINDA NGV L              HRG  LH+   G+  +  +L  AV G++DW   R +I+ EL  IA +I    F
Sbjct: 2927 SGEHAHHIVAAGIEFKDKSAVKGRQLLDFFQIDINDAGNGVRLT----------KEQHRG-ALHS-KKGVALVYSKLTAAVKGIDDWDVARSKILDELADIADDIKSEEF 3024          
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: A0A1C4DRA6_9GAMM (RHS repeat-associated core domain-containing protein (Fragment) n=5 Tax=Gilliamella TaxID=1193503 RepID=A0A1C4DRA6_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 1.260e-7
Identity = 40/94 (42.55%), Postives = 51/94 (54.26%), Query Frame = 0
Query:   10 AHHIVPGKVKRAEASRKLLERYQVDINDAVNGVPLVGGKGAAKDVLPRHHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELEVIA 103
            AHHIV    KRAE +RK+LE+Y +DIN A+NGV L   K  +K     H   NG H  D  I ++N RL  A     D    ++ I  EL+ IA
Sbjct:   54 AHHIVAESAKRAEPARKILEKYGIDINGAMNGVFLPTNKNTSKLPGIMH---NGRHPNDY-INEVNKRLRNA-----DKIGTKEAIEAELKNIA 138          
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: UPI001F22DD48 (polymorphic toxin-type HINT domain-containing protein n=1 Tax=Nonomuraea antri TaxID=2730852 RepID=UPI001F22DD48)

HSP 1 Score: 57.8 bits (138), Expect = 2.250e-7
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    5 GSGLDAHHIVPGKVKRAEASRKLLERYQVDINDAVNGVPLVGG--KGAAKDVLPRHHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELEVIAKEILDG 109
            G G  AHHIV GK  RA  +RK L+++ +DINDAVNGV L GG  K      +P H R   +HT +T    +ND L+ A          R   I+ L  + +E+ DG
Sbjct:  396 GPGEAAHHIVAGKDLRAAPARKALDKFGIDINDAVNGVWLPGGSKKPNPGGSIP-HSR---VHT-NTYYDSVNDALSMA--------RSRSEAIEILAQLRRELRDG 489          
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: A0A844X0D7_9GAMM (Uncharacterized protein n=1 Tax=Gilliamella sp. Pas-s25 TaxID=2687310 RepID=A0A844X0D7_9GAMM)

HSP 1 Score: 51.6 bits (122), Expect = 6.150e-6
Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 0
Query:   10 AHHIVPGKVKRAEASRKLLERYQVDINDAVNGVPLVGGKGAAKDVLPRHHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELEVIA 103
            AHHIV    K AE +RK+LE+Y +DIN A+NGV L   K  +      H   NG H  +  I  +NDRL  A     D    ++ I  EL+ IA
Sbjct:   25 AHHIVAEGAKNAEPARKILEKYGIDINGAMNGVFLPTNKNTSNLPGIMH---NGRHP-NAYIDAVNDRLKMA-----DKIGTKEAIEAELKNIA 109          
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: UPI00201F3C51 (DUF6531 domain-containing protein n=1 Tax=Flavobacterium sp. B183 TaxID=907046 RepID=UPI00201F3C51)

HSP 1 Score: 52.4 bits (124), Expect = 1.890e-5
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    7 GLDAHHIVPGKVKRAEASRKLLERYQVDINDAVNGVPLVGGKGAAKDVLPR------HHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELEVIAKEIL 107
            G  AHH+V G   RA+ +R++LE++Q+DIN A NG+ L       K + P       +HR   +HT D   + +N R+  A     D   G+Q ++ EL  I+ ++L
Sbjct: 1303 GSAAHHMVAGDDVRADPARRILEKHQIDINSAENGIYL-------KHIDPNSIQPGAYHRV--IHT-DKYYENINQRIIDA-----DALGGKQGVLDELNSISDDLL 1394          
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Match: A0A2S6WDS0_9ACTN (DUF6531 domain-containing protein n=1 Tax=Streptomyces sp. 46 TaxID=1777322 RepID=A0A2S6WDS0_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 2.590e-5
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 GIAEGSGLDAHHIVPGKVKRAEA--SRKLLERYQVDINDAVNGVPL 44
            G  +G G  A HIVP  +KR  A  SR LLERY VDINDAVNG+PL
Sbjct: 1385 GRGKGVGEAAAHIVPSGMKRNRAAESRALLERYGVDINDAVNGIPL 1430          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111225.2347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A517T9Y2_9PLAN1.270e-939.09Cadherin domain protein n=2 Tax=Calycomorphotria h... [more]
A0A1C4DRA6_9GAMM1.260e-742.55RHS repeat-associated core domain-containing prote... [more]
UPI001F22DD482.250e-740.19polymorphic toxin-type HINT domain-containing prot... [more]
A0A844X0D7_9GAMM6.150e-640.43Uncharacterized protein n=1 Tax=Gilliamella sp. Pa... [more]
UPI00201F3C511.890e-533.64DUF6531 domain-containing protein n=1 Tax=Flavobac... [more]
A0A2S6WDS0_9ACTN2.590e-563.04DUF6531 domain-containing protein n=1 Tax=Streptom... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032871AHH domain-containing proteinPFAMPF14412AHHcoord: 4..106
e-value: 7.2E-14
score: 51.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111225contigM-pyrifera_M_contig111225:190..531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111225.2347.1mRNA_M-pyrifera_M_contig111225.2347.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111225 190..531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111225.2347.1 ID=prot_M-pyrifera_M_contig111225.2347.1|Name=mRNA_M-pyrifera_M_contig111225.2347.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
GIAEGSGLDAHHIVPGKVKRAEASRKLLERYQVDINDAVNGVPLVGGKGA
AKDVLPRHHRGNGLHTGDTGIQQLNDRLAQAVDGVEDWATGRQRIIQELE
VIAKEILDGTFPH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032871AHH_dom_containing