prot_M-pyrifera_M_contig111112.2323.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111112.2323.1
Unique Nameprot_M-pyrifera_M_contig111112.2323.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: C3YNI2_BRAFL (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YNI2_BRAFL)

HSP 1 Score: 146 bits (369), Expect = 1.070e-40
Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVH---SIISDAFWEKLLLLIDAPFLALSATLGAPESFASWLAS 156
            VDN +SALI+APTSSGKT+ SYY ++ VL++GD+GVV++V PT  LV Q    V  RF      D   +   FTR+YR + L+ Q++VT P+C E +L  P      + +R+V+FDEVH   S I    WE LLLLI  PFLALSAT+  P    SWL S
Sbjct:   48 VDNNESALIVAPTSSGKTYASYYCMEKVLRDGDDGVVVYVSPTKALVNQVAATVYARFSNKTMPDGMSVYGVFTRDYRHNALNCQILVTVPQCLEILLLAPHRQKWAQKIRYVIFDEVHCMGSEIGAEVWEHLLLLIPCPFLALSATISNPHDLQSWLQS 207          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A2K6ELZ6_PROCO (DExD/H-box helicase 60 n=2 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6ELZ6_PROCO)

HSP 1 Score: 152 bits (385), Expect = 1.280e-39
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASVL---VRRDSLRKRALLSHAREG 176
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E D+GVV++V PT  LV Q    V  RF K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDEVH +   I    WE LL++I  PFLALSAT+  PE    WL SV       D + +R + + +REG
Sbjct:  773 VDNHESAVIVAPTSSGKTYASYYCMEKVLRESDDGVVVYVAPTKALVNQVAATVHNRFTKNLPSGTA-LCGVFTREYRHDALNCQVLVTVPACFEILLLAPHRQNWVKRIRYVIFDEVHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKRYWKEEDKIMERNVAAKSREG 954          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A2U3Z847_LEPWE (probable ATP-dependent RNA helicase DDX60 n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A2U3Z847_LEPWE)

HSP 1 Score: 142 bits (358), Expect = 4.430e-39
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E  EGVV++V PT  LV Q    V+ RF K   +    +   FTR+YR D L+ QV++T P C E +L  P     V+ +R+V+FDEVH +   I    WE LL++I  PFLALSAT+  P+    WL SV
Sbjct:    7 VDNNESAVIVAPTSSGKTYASYYCMEKVLKESSEGVVVYVAPTKALVNQVAATVQNRFTKSLPNG-EALCGVFTRDYRHDALNCQVLITVPACFEILLLAPHRQTWVKRIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPQHLTEWLQSV 166          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A8C0WMK8_CASCN (DExD/H-box helicase 60 n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0WMK8_CASCN)

HSP 1 Score: 150 bits (378), Expect = 1.110e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    V+ R+ K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDE+H +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  529 VDNYESAVIVAPTSSGKTYASYYCMERVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKNLPSGGA-LCGVFTREYRQDALNSQVLVTVPACLEILLLAPHRQNWVKRIRYVIFDEIHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 688          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A8C0ZSI0_CASCN (DExD/H-box helicase 60 n=3 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0ZSI0_CASCN)

HSP 1 Score: 150 bits (378), Expect = 1.110e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    V+ R+ K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDE+H +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  510 VDNYESAVIVAPTSSGKTYASYYCMERVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKNLPSGGA-LCGVFTREYRQDALNSQVLVTVPACLEILLLAPHRQNWVKRIRYVIFDEIHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 669          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A8B7VB24_CASCN (probable ATP-dependent RNA helicase DDX60 n=3 Tax=Castor canadensis TaxID=51338 RepID=A0A8B7VB24_CASCN)

HSP 1 Score: 150 bits (378), Expect = 1.110e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    V+ R+ K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDE+H +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  532 VDNYESAVIVAPTSSGKTYASYYCMERVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKNLPSGGA-LCGVFTREYRQDALNSQVLVTVPACLEILLLAPHRQNWVKRIRYVIFDEIHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 691          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A8C0ZS66_CASCN (DExD/H-box helicase 60 n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0ZS66_CASCN)

HSP 1 Score: 150 bits (378), Expect = 1.110e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    V+ R+ K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDE+H +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  529 VDNYESAVIVAPTSSGKTYASYYCMERVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKNLPSGGA-LCGVFTREYRQDALNSQVLVTVPACLEILLLAPHRQNWVKRIRYVIFDEIHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 688          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A8C0WU34_CASCN (DExD/H-box helicase 60 n=4 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0WU34_CASCN)

HSP 1 Score: 150 bits (378), Expect = 1.110e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    V+ R+ K+  S    +   FTREYR D L+ QV+VT P C E +L  P   N V+ +R+V+FDE+H +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  560 VDNYESAVIVAPTSSGKTYASYYCMERVLKESDEGVVVYVAPTKALVNQVAATVQHRYTKNLPSGGA-LCGVFTREYRQDALNSQVLVTVPACLEILLLAPHRQNWVKRIRYVIFDEIHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 719          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A6P7R5S8_MUSCR (probable ATP-dependent RNA helicase DDX60 isoform X3 n=1 Tax=Mus caroli TaxID=10089 RepID=A0A6P7R5S8_MUSCR)

HSP 1 Score: 149 bits (376), Expect = 2.080e-38
Identity = 79/161 (49.07%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VDN +SA+I+APTSSGKT+ SYY ++ VL+E DEGVV++V PT  LV Q    VE R+ K+  +  + +   FTREYR D L+ QV++T P C E +L  P   N V+ +R+V+FDEVH +   I    WE LL++I  PFLALSAT+  P+    WL SV
Sbjct:  773 VDNYESAVIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVEYRYAKNMPAG-QSLCGVFTREYRHDALNCQVLITVPACFEILLLAPHRQNWVKRIRYVIFDEVHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPQHLTEWLQSV 932          
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Match: A0A287ABK4_PIG (DExD/H-box helicase 60 n=52 Tax=Suina TaxID=35497 RepID=A0A287ABK4_PIG)

HSP 1 Score: 149 bits (376), Expect = 2.080e-38
Identity = 78/161 (48.45%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQTGDEVEVRFRKDYGSDPRPIVATFTREYRDD-LHRQVIVTTPECAETILTVPRYGNIVRNLRWVVFDEVHSI---ISDAFWEKLLLLIDAPFLALSATLGAPESFASWLASV 157
            VD  +SA+I+APTSSGKT+ SYY ++ VL+EGD+GVV++V PT  LV Q    V+ RFRK+   D   +   FTR+YR D L+ Q+++T P C E +L  P     V+ +R+V+FDEVH +   I    WE LL++I  PFLALSAT+  PE    WL SV
Sbjct:  735 VDKNESAVIVAPTSSGKTYASYYCMERVLREGDDGVVVYVAPTKALVNQVAATVQNRFRKNL-PDGEALCGVFTRDYRHDALNSQILITVPACFEILLLAPHRQAWVKRIRYVIFDEVHCLGGEIGAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSV 894          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111112.2323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
C3YNI2_BRAFL1.070e-4048.75Helicase ATP-binding domain-containing protein (Fr... [more]
A0A2K6ELZ6_PROCO1.280e-3946.99DExD/H-box helicase 60 n=2 Tax=Propithecus coquere... [more]
A0A2U3Z847_LEPWE4.430e-3947.20probable ATP-dependent RNA helicase DDX60 n=1 Tax=... [more]
A0A8C0WMK8_CASCN1.110e-3849.69DExD/H-box helicase 60 n=1 Tax=Castor canadensis T... [more]
A0A8C0ZSI0_CASCN1.110e-3849.69DExD/H-box helicase 60 n=3 Tax=Castor canadensis T... [more]
A0A8B7VB24_CASCN1.110e-3849.69probable ATP-dependent RNA helicase DDX60 n=3 Tax=... [more]
A0A8C0ZS66_CASCN1.110e-3849.69DExD/H-box helicase 60 n=1 Tax=Castor canadensis T... [more]
A0A8C0WU34_CASCN1.110e-3849.69DExD/H-box helicase 60 n=4 Tax=Castor canadensis T... [more]
A0A6P7R5S8_MUSCR2.080e-3849.07probable ATP-dependent RNA helicase DDX60 isoform ... [more]
A0A287ABK4_PIG2.080e-3848.45DExD/H-box helicase 60 n=52 Tax=Suina TaxID=35497 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..175
e-value: 1.9E-4
score: 30.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..162
score: 18.073
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 5..145
e-value: 9.8E-14
score: 51.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..164
e-value: 1.1E-34
score: 121.2
NoneNo IPR availablePANTHERPTHR44533FAMILY NOT NAMEDcoord: 1..159
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111112contigM-pyrifera_M_contig111112:5..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111112.2323.1mRNA_M-pyrifera_M_contig111112.2323.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111112 5..532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111112.2323.1 ID=prot_M-pyrifera_M_contig111112.2323.1|Name=mRNA_M-pyrifera_M_contig111112.2323.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
VDNRQSALIIAPTSSGKTFVSYYAVKGVLQEGDEGVVMFVVPTSQLVRQT
GDEVEVRFRKDYGSDPRPIVATFTREYRDDLHRQVIVTTPECAETILTVP
RYGNIVRNLRWVVFDEVHSIISDAFWEKLLLLIDAPFLALSATLGAPESF
ASWLASVLVRRDSLRKRALLSHAREG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase