prot_M-pyrifera_M_contig111050.2311.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111050.2311.1
Unique Nameprot_M-pyrifera_M_contig111050.2311.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A182XPT2_ANOQN (Ion_trans domain-containing protein n=2 Tax=gambiae species complex TaxID=44542 RepID=A0A182XPT2_ANOQN)

HSP 1 Score: 73.2 bits (178), Expect = 2.240e-14
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:   34 NRFRQFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNKFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 114
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BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A2S1ZNL4_NEOTR (Voltage-dependent L-type calcium channel subunit alpha (Fragment) n=1 Tax=Neoconocephalus triops TaxID=642721 RepID=A0A2S1ZNL4_NEOTR)

HSP 1 Score: 74.3 bits (181), Expect = 1.120e-13
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPT-PSDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR+R  C  +   + F   IL+CI+ +S MLA EDP    +  +DVL WFDL F  VFT E+ +K++++GF LH GA+ RS
Sbjct:  819 NRIRVFCHWLCNHSYFGNVILVCIMISSSMLAAEDPLRGDSFRNDVLSWFDLFFTIVFTIEICLKMVSYGFVLHEGAFCRS 899
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BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A7R9BQ61_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BQ61_9CRUS)

HSP 1 Score: 73.9 bits (180), Expect = 1.530e-13
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0 
Query:    4 RVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            R R +C  V   + F   IL CI+ +S MLA EDP  + +P + +L +FD+ F +VFT E+ IK+IA+GF LH GA+LRS
Sbjct:  591 RFRVMCHFVCNHSYFSNIILACILISSAMLAAEDPLQSSSPRNQILNYFDMFFTSVFTVEICIKVIAYGFILHDGAFLRS 670
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A2M4CP11_ANODA (Putative voltage-dependent p/q type calcium channel (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CP11_ANODA)

HSP 1 Score: 73.6 bits (179), Expect = 2.080e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  343 NRFRLFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 423
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A182VSR0_9DIPT (Voltage-dependent L-type calcium channel subunit alpha n=1 Tax=Anopheles minimus TaxID=112268 RepID=A0A182VSR0_9DIPT)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  684 NRFRQFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 764
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A182IP03_9DIPT (Voltage-dependent L-type calcium channel subunit alpha n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182IP03_9DIPT)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  730 NRFRKFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 810
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: W5JR46_ANODA (Voltage-dependent L-type calcium channel subunit alpha n=3 Tax=Nyssorhynchus TaxID=44543 RepID=W5JR46_ANODA)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  722 NRFRLFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 802
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A182N8Y0_9DIPT (Voltage-dependent L-type calcium channel subunit alpha n=5 Tax=Cellia TaxID=44534 RepID=A0A182N8Y0_9DIPT)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  753 NRFRQFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 833
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: A0A3Q0KD42_SCHMA (Voltage-dependent L-type calcium channel subunit alpha n=10 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KD42_SCHMA)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTPSD-VLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            N+ R  C  V   + F   +L+CI+ +SI+LA EDP HA +P + +L  FD  F +VFT E+ +K+I++GF LH GA+ RS
Sbjct:  801 NKFRIFCHNVVCFSHFGNIVLVCILVSSILLAAEDPLHANSPRNRILNMFDYFFTSVFTVEITLKMISYGFVLHEGAFCRS 881
[Close]
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Match: UPI0016587EC4 (muscle calcium channel subunit alpha-1-like isoform X1 n=3 Tax=Cellia TaxID=44534 RepID=UPI0016587EC4)

HSP 1 Score: 73.6 bits (179), Expect = 2.090e-13
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 NRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTP-SDVLFWFDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS 82
            NR R  C  +   T F   ILLCI+ +S+MLA EDP +A +  + +L  FD  F AVF  E+++K+IA+GF LH GA+ RS
Sbjct:  897 NRFRQFCHWLCNHTVFGNIILLCIMLSSVMLAAEDPLNANSERNQILNQFDFFFTAVFAIELILKVIAYGFILHKGAFCRS 977
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111050.2311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182XPT2_ANOQN2.240e-1446.91Ion_trans domain-containing protein n=2 Tax=gambia... [more]
A0A2S1ZNL4_NEOTR1.120e-1345.68Voltage-dependent L-type calcium channel subunit a... [more]
A0A7R9BQ61_9CRUS1.530e-1347.50Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
A0A2M4CP11_ANODA2.080e-1346.91Putative voltage-dependent p/q type calcium channe... [more]
A0A182VSR0_9DIPT2.090e-1346.91Voltage-dependent L-type calcium channel subunit a... [more]
A0A182IP03_9DIPT2.090e-1346.91Voltage-dependent L-type calcium channel subunit a... [more]
W5JR46_ANODA2.090e-1346.91Voltage-dependent L-type calcium channel subunit a... [more]
A0A182N8Y0_9DIPT2.090e-1346.91Voltage-dependent L-type calcium channel subunit a... [more]
A0A3Q0KD42_SCHMA2.090e-1344.44Voltage-dependent L-type calcium channel subunit a... [more]
UPI0016587EC42.090e-1346.91muscle calcium channel subunit alpha-1-like isofor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 6..82
e-value: 6.8E-17
score: 63.5
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 17..82
e-value: 1.2E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR45628FAMILY NOT NAMEDcoord: 2..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..52
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 16..75
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111050contigM-pyrifera_M_contig111050:4..249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111050.2311.1mRNA_M-pyrifera_M_contig111050.2311.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111050 4..270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111050.2311.1 ID=prot_M-pyrifera_M_contig111050.2311.1|Name=mRNA_M-pyrifera_M_contig111050.2311.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MDNRVRAICFTVATSTPFDAFILLCIVTNSIMLALEDPGHAPTPSDVLFW
FDLAFQAVFTAEMLIKIIAFGFALHAGAYLRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf
IPR005821Ion_trans_dom