prot_M-pyrifera_M_contig110914.2288.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110914.2288.1
Unique Nameprot_M-pyrifera_M_contig110914.2288.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length196
Homology
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A7C2B141_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2B141_9BACT)

HSP 1 Score: 179 bits (455), Expect = 1.110e-53
Identity = 104/195 (53.33%), Postives = 129/195 (66.15%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTAL 195
            LTHAS D   NNERLEFLGDTVLDLV+AE LYR++P   EG M+  KAW+VSR+TLA+ A  L +   AR G+ +  + VP S+ ANL+E ++GAL+LD GL+ A +F+  +LA  L +       +N KQ LQ  AQ     PP Y  +EE+G     AF V AEI GRRFP AWGRTRKEAE+ AA EAL  L
Sbjct:   18 LTHASADATHNNERLEFLGDTVLDLVIAEYLYRQTPELDEGTMTERKAWVVSRETLARIAHDLGMHRMARFGQGMRTREVPRSVLANLYEGYVGALYLDGGLEPARSFILDSLADALVEIGHGAETKNPKQELQHLAQTLTGKPPRYRLVEERGHAHTRAFLVAAEIEGRRFPGAWGRTRKEAERWAAFEALIVL 212          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A7C8CTZ4_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTZ4_9BACT)

HSP 1 Score: 179 bits (453), Expect = 1.860e-53
Identity = 106/192 (55.21%), Postives = 128/192 (66.67%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREAL 192
            LTH+S    R+NERLEFLGDTVLDL+VAEELY+R P   EG ++  KA +VSR+TLA AA+   LA   R G  L  +A+P S+ AN++EAW+GA++LDAGLDAA AFV A LA  L QA       N KQ LQ+ AQ     PP Y  ++E G     AF V AE+ GR FP AWGRT KEAE+ AA EAL
Sbjct:   19 LTHSSTGLPRDNERLEFLGDTVLDLIVAEELYQRHPDLDEGQLTEFKADIVSRRTLADAAREASLADPVRFGAGLRGRALPRSVLANIYEAWLGAIYLDAGLDAAQAFVLATLAEPLAQAAVAQAPENPKQELQQIAQRELGEPPAYRVIDEFGRAHARAFLVSAEVGGRCFPPAWGRTLKEAERWAAHEAL 210          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A521K997_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K997_9BACT)

HSP 1 Score: 178 bits (452), Expect = 4.280e-53
Identity = 106/192 (55.21%), Postives = 127/192 (66.15%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREAL 192
            LTHASFDG RNNER E LGD  L L VA+EL  R P ASEG +SR +AW+VS+  LA AA  LDLAARAR+G  ++   +P  + A+L+EA +GA+  D G +A AAFV A L   L  A  +    + KQ LQEWAQAR    P Y  L E GS    +F+V  E+AG R PAAWGRTRKEAE+ AAREAL
Sbjct:   26 LTHASFDGRRNNERYELLGDAALSLAVAQELLARLPDASEGELSRRRAWVVSQPVLAAAAVELDLAARARIGAGVDRAHLPARMLASLYEAVLGAIQEDRGHEAVAAFVRATLRGPLETACAERFELDPKQELQEWAQARSLGLPRYVLLAEDGSPHTRSFQVAVEVAGARHPAAWGRTRKEAERFAAREAL 217          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A2D5W7N5_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W7N5_9BACT)

HSP 1 Score: 176 bits (446), Expect = 2.200e-52
Identity = 105/196 (53.57%), Postives = 129/196 (65.82%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTHAS    +NNERLEFLGD VLDL+VAEELYR      EG M+  K+ +VSR+TLAQ A+ LDL  RA LG  L  + +  ++ ANL+EA +GA++LDAGL+A   F+   LA  L +A+      N KQRLQE  QAR  APP+Y T+E +G+    AF V+     R FP AWGRTRKEAEQ AA EAL  LE
Sbjct:   18 LTHASTRQPQNNERLEFLGDAVLDLLVAEELYRSPADLDEGQMTEFKSHVVSRRTLAQGARNLDLQERAHLGSGLARRTLSRAVLANLYEAVLGAVYLDAGLEACRTFMRTTLATPLGEALAKRGTDNPKQRLQETCQARWGAPPEYETIETRGAAHARAFLVRVNTDARSFPTAWGRTRKEAEQWAAHEALLILE 213          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A523PG41_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PG41_9BACT)

HSP 1 Score: 170 bits (430), Expect = 6.680e-50
Identity = 101/200 (50.50%), Postives = 131/200 (65.50%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIA----GRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTH+S +   +NERLEFLGD  LDL+VAEEL+R  P  +EG ++  KAW+VSRKTLA+AA++L L   AR+G+ L ++ +  S+ ANL+EA +GA++LD GL+ A AFV   LA  LT+  +     N KQ LQE +Q     PP+Y  LE +G     AF V A++       RFP AWGRTRKEAEQ AA EAL  LE
Sbjct:   18 LTHSSMESRADNERLEFLGDAALDLIVAEELFRHHPDLAEGDLTELKAWVVSRKTLAEAARKLGLERLARVGRGLSNRTLSRSVLANLYEAVLGAVYLDGGLERAHAFVMTTLAEPLTEVREQRCGVNSKQALQELSQKHWGTPPEYVELERRGLAHARAFLVCAQVRTGDRDERFPPAWGRTRKEAEQWAAYEALLVLE 217          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A518D450_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D450_9BACT)

HSP 1 Score: 169 bits (429), Expect = 1.070e-49
Identity = 100/195 (51.28%), Postives = 124/195 (63.59%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTAL 195
            LTHAS DG   NERLEFLGD VLDL+VAE LY   P   EG M++AK W+VSRKTLA AA+ + L   A+ G+ LE      ++ ANL+EA++GA++LD GL+ A  F    L+  L +        + KQ LQE  QARGE PP Y  LEE+      AFR+ A + G+ +PAAWGRTRKEAE  AA EAL  L
Sbjct:   18 LTHASVDGAEPNERLEFLGDAVLDLIVAEWLYVEHPEKREGDMTKAKGWIVSRKTLADAARDMGLWEAAKKGRGLEGTTPSRAVLANLYEAFLGAIYLDGGLEPAKKFALMTLSTYLVRGTRQADEASPKQALQEHVQARGEDPPRYELLEERSHLHVRAFRMAARVGGQTYPAAWGRTRKEAEGWAAHEALLVL 212          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A518BRK4_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BRK4_9BACT)

HSP 1 Score: 168 bits (426), Expect = 2.390e-49
Identity = 102/196 (52.04%), Postives = 129/196 (65.82%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTHAS  G  +NERLEFLGD VLDL+VAE L++  P ASEG ++  KA +VSR++LA AAK LDL   AR+G+ L    +P S+ ANL+EA +GA++LD GL+A+  FV  +L   L  A         KQRLQ  AQ R  +PP Y  + E+G     AF V A+I G RFP+AWGRTRKEAE+ AA EAL  L+
Sbjct:   18 LTHASSTGGEDNERLEFLGDAVLDLLVAEHLFQVDPRASEGELTERKAMVVSRQSLALAAKSLDLDREARVGRGLRDSTLPRSVLANLYEAILGAIYLDGGLEASREFVDESLGEALGVAARQPGGAEPKQRLQHLAQTRTGSPPTYVVVAERGQAHARAFLVAAQIDGDRFPSAWGRTRKEAERWAALEALLVLD 213          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A2D5AWP7_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AWP7_9BACT)

HSP 1 Score: 167 bits (424), Expect = 4.510e-49
Identity = 97/196 (49.49%), Postives = 126/196 (64.29%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTHAS     +NERLEFLGD VLDL+VAEELYR+ P  +EGAM+  KAW+VSR+ LA   + + + A AR+G  + ++ +P S+ AN++EA++GA++LD GL+AA  F    L   LT+ +      N KQ LQ   Q     PP Y  + E+G     AF V AEI  RRFP+AWGRT KEAE+ AA EAL  LE
Sbjct:   18 LTHASTGAAEDNERLEFLGDAVLDLIVAEELYRQRPNHAEGAMTELKAWIVSRRVLADVTRDIGMDAIARIGLGMRNRVLPRSVLANIYEAYLGAVYLDGGLEAARRFARITLDKPLTRILTAEGEPNPKQTLQRHGQLATGEPPTYVVVRERGHAHAKAFLVAAEIGKRRFPSAWGRTLKEAERWAAHEALLVLE 213          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A2D6HHA3_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HHA3_9BACT)

HSP 1 Score: 167 bits (424), Expect = 4.780e-49
Identity = 103/196 (52.55%), Postives = 124/196 (63.27%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTH+S    R+NERLEFLGD VLDL+ AE LY       EG M+  KA +VSR+ LA+AA RL L   A +G  L  +A P S+ ANL+EA +GA++LD GL++A AF HA LA E  +  +   A N KQ LQE  Q R  APP Y TL+ +G     AF V AE  G RFPAAWGR  KEAE+ AA EAL  LE
Sbjct:   18 LTHSSTGARRDNERLEFLGDAVLDLLTAEHLYADPDDLPEGLMTELKASVVSRRPLAEAATRLGLEELAHIGPGLRRRAFPRSVLANLYEAVLGAVYLDGGLESAHAFAHATLAEEFARTREVKSAANPKQELQELCQKRWGAPPAYQTLDRRGRAHARAFLVAAEADGNRFPAAWGRNLKEAERWAAFEALLVLE 213          
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Match: A0A2E5X3I3_9BACT (Ribonuclease 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X3I3_9BACT)

HSP 1 Score: 166 bits (420), Expect = 1.870e-48
Identity = 102/196 (52.04%), Postives = 129/196 (65.82%), Query Frame = 0
Query:    1 LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWLVSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDAGLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTLEEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE 196
            LTHAS    ++NERLEFLGD VLDL+VAEEL+R     +EG ++  K+ +VSR+TLA+AA+ L L   ARLG  L  +A+  S+ ANL+EA  GA++LDAGL+A   F+ A LA  L +A+      N K+RLQE  QAR   PP+Y T+E +G+    AF V      R FP AWGRTRKEAEQ AA EAL  LE
Sbjct:   18 LTHASTRSAQDNERLEFLGDAVLDLLVAEELFRAHADLNEGELTEFKSHVVSRRTLAEAARGLGLHDLARLGSGLARRALSRSVLANLYEAVFGAVYLDAGLEAGREFMRATLAKPLGEALARRGTDNPKKRLQEICQARWGEPPEYETIETRGAAHARAFLVCVNAGSRAFPTAWGRTRKEAEQWAAHEALLILE 213          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110914.2288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2B141_9BACT1.110e-5353.33Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A7C8CTZ4_9BACT1.860e-5355.21Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A521K997_9BACT4.280e-5355.21Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A2D5W7N5_9BACT2.200e-5253.57Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A523PG41_9BACT6.680e-5050.50Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A518D450_9BACT1.070e-4951.28Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Pl... [more]
A0A518BRK4_9BACT2.390e-4952.04Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Pl... [more]
A0A2D5AWP7_9BACT4.510e-4949.49Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A2D6HHA3_9BACT4.780e-4952.55Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]
A0A2E5X3I3_9BACT1.870e-4852.04Ribonuclease 3 n=1 Tax=Planctomycetes bacterium Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 129..196
e-value: 3.2E-14
score: 63.2
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 130..194
e-value: 4.9E-13
score: 49.6
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 128..196
score: 17.355
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 1..122
e-value: 2.2E-28
score: 110.3
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 1..115
e-value: 3.7E-24
score: 85.3
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..101
score: 30.967
IPR011907Ribonuclease IIITIGRFAMTIGR02191TIGR02191coord: 1..194
e-value: 5.8E-54
score: 180.9
IPR011907Ribonuclease IIIHAMAPMF_00104RNase_IIIcoord: 1..192
score: 20.694
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 1..126
e-value: 1.4E-32
score: 114.3
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 1..118
NoneNo IPR availableGENE3D3.30.160.20coord: 127..196
e-value: 1.4E-17
score: 65.8
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 1..195
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 83..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110914contigM-pyrifera_M_contig110914:6..593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110914.2288.1mRNA_M-pyrifera_M_contig110914.2288.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110914 6..593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110914.2288.1 ID=prot_M-pyrifera_M_contig110914.2288.1|Name=mRNA_M-pyrifera_M_contig110914.2288.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
LTHASFDGERNNERLEFLGDTVLDLVVAEELYRRSPGASEGAMSRAKAWL
VSRKTLAQAAKRLDLAARARLGKSLEHQAVPTSIHANLFEAWIGALHLDA
GLDAAAAFVHAALAPELTQAVDDGVARNHKQRLQEWAQARGEAPPDYHTL
EEQGSFERSAFRVQAEIAGRRFPAAWGRTRKEAEQHAAREALTALE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
IPR000999RNase_III_dom
IPR011907RNase_III
IPR036389RNase_III_sf