prot_M-pyrifera_M_contig110859.2283.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110859.2283.1
Unique Nameprot_M-pyrifera_M_contig110859.2283.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig110859.2283.1 vs. uniprot
Match: D8LLV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLV1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 9.080e-18
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 0 
Query:    1 LGRLINILLNNCEYVEDRLIKEKRYQDACRNPTLVTGLDLKRKFVATLAKRV 52
            L + INILLNNCE++ +RL  EKRYQDACR+PTL +GLDLKR+FVA LAKRV
Sbjct:  159 LHKFINILLNNCEFISERLASEKRYQDACRDPTLPSGLDLKRQFVAPLAKRV 210
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110859.2283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLV1_ECTSI9.080e-1873.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110859contigM-pyrifera_M_contig110859:277..432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110859.2283.1mRNA_M-pyrifera_M_contig110859.2283.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110859 277..432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110859.2283.1 ID=prot_M-pyrifera_M_contig110859.2283.1|Name=mRNA_M-pyrifera_M_contig110859.2283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
LGRLINILLNNCEYVEDRLIKEKRYQDACRNPTLVTGLDLKRKFVATLAK
RV
back to top