prot_M-pyrifera_M_contig11079.2269.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11079.2269.1
Unique Nameprot_M-pyrifera_M_contig11079.2269.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
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BLAST of mRNA_M-pyrifera_M_contig11079.2269.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 4.430e-22
Identity = 73/165 (44.24%), Postives = 85/165 (51.52%), Query Frame = 0 
Query:    1 MRRAGVRPDIKSFAASLACLRAGGKWERAVELLDEM---------------ESGKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXLRILQRRGAAGAAAW---AVEQSSVAGWDAERLAAEATGHAAKTSLSNA-GPNLVCYNAAMAACARAGEWAPALELLKEME 146
            M   GVRPD+ S+   LACLRAGG+W+RAVE+LDEM               E    G                           LR LQR+G++ A      A  +   AGWDA  LAAEA G  A  S S A GPNLVCYNAA+ ACARA E + ALELL+EME
Sbjct:  628 MLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGTGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATCGEEPAAREERAAGWDA--LAAEARGGGAAISSSPAAGPNLVCYNAALTACARAREGSTALELLQEME 790
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BLAST of mRNA_M-pyrifera_M_contig11079.2269.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-21
Identity = 73/166 (43.98%), Postives = 86/166 (51.81%), Query Frame = 0 
Query:    1 MRRAGVRPDIKSFAASLACLRAGGKWERAVELLDEM---------------ESGKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXLRILQRRGAAGAAAW----AVEQSSVAGWDAERLAAEATGHAAKTSLSNA-GPNLVCYNAAMAACARAGEWAPALELLKEME 146
            M   GVRPD+ S+   LACLRAGG+W+RAVE+LDEM               E    G                           LR LQR+G++ AA W    A  +   A WDA  LAAEA G  A  S S A GPNLVCYNAA+ ACARA E + AL+LL+EME
Sbjct:  378 MLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSS-AATWGEEPAAREEPAAAWDA--LAAEARGGGAAISSSPAAGPNLVCYNAALTACARAKEGSTALDLLEEME 540
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11079.2269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUL4_9PHAE4.430e-2244.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMP8_ECTSI1.500e-2143.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 1..59
e-value: 0.0033
score: 17.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 120..146
e-value: 4.4E-4
score: 18.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 120..146
e-value: 3.3E-4
score: 20.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 8.374
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 118..146
score: 9.865
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 7.706
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..110
e-value: 1.3E-15
score: 59.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 111..146
e-value: 8.9E-6
score: 27.5
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 1..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11079contigM-pyrifera_M_contig11079:5710..6147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11079.2269.1mRNA_M-pyrifera_M_contig11079.2269.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11079 5683..6147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11079.2269.1 ID=prot_M-pyrifera_M_contig11079.2269.1|Name=mRNA_M-pyrifera_M_contig11079.2269.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MRRAGVRPDIKSFAASLACLRAGGKWERAVELLDEMESGKHGLSPDLGCY
GAVMTTLGEAGQWERALDLLRILQRRGAAGAAAWAVEQSSVAGWDAERLA
AEATGHAAKTSLSNAGPNLVCYNAAMAACARAGEWAPALELLKEME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf