prot_M-pyrifera_M_contig110741.2251.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110741.2251.1
Unique Nameprot_M-pyrifera_M_contig110741.2251.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length39
Homology
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 3.520e-13
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            SSC+VTQLLEVLLIRLGLYLLNSPAV LDLVAYTGYK
Sbjct:  196 SSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 232          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 7.220e-13
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            SSC+VTQLLEVLLIRLGLYLLNSPAV LDL+AYTGYK
Sbjct:  322 SSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYK 358          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.030e-8
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            SS +V QLLEVLL+RLGLYLL +PA  LDLVA+TGYK
Sbjct:  124 SSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYK 160          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.750e-8
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            SSCLV QLLE+ +IRLGLYLL +PA  LDL+A TGYK
Sbjct:  246 SSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYK 282          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: K0R137_THAOC (Protein YIF1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R137_THAOC)

HSP 1 Score: 50.8 bits (120), Expect = 3.310e-6
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            S CLVTQ+LE++ IR+G YL+ +P   LDL  YTGYK
Sbjct:  222 SKCLVTQILEMIAIRIGFYLMEAPVGVLDLACYTGYK 258          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: A0A024UUY6_9STRA (Protein YIF1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUY6_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 2.990e-5
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            +SC + QLLE+ L++LGLYLLNS    LDLV++TGYK
Sbjct:  238 TSCCLLQLLEICLMKLGLYLLNSQINWLDLVSFTGYK 274          
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Match: A0A3R6YG55_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YG55_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 2.990e-5
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    2 SSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK 38
            +SC + QLLE+ L++LGLYLLNS    LDLV++TGYK
Sbjct:  336 TSCCLLQLLEICLMKLGLYLLNSQINWLDLVSFTGYK 372          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110741.2251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FLH1_ECTSI3.520e-1394.59Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JNN8_9PHAE7.220e-1391.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSN9_9STRA1.030e-875.68Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA7.750e-872.97Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
K0R137_THAOC3.310e-659.46Protein YIF1 n=1 Tax=Thalassiosira oceanica TaxID=... [more]
A0A024UUY6_9STRA2.990e-562.16Protein YIF1 n=1 Tax=Aphanomyces invadans TaxID=15... [more]
A0A3R6YG55_9STRA2.990e-562.16Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005578Yif1 familyPFAMPF03878YIF1coord: 2..38
e-value: 1.6E-6
score: 27.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110741contigM-pyrifera_M_contig110741:284..400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110741.2251.1mRNA_M-pyrifera_M_contig110741.2251.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110741 266..400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110741.2251.1 ID=prot_M-pyrifera_M_contig110741.2251.1|Name=mRNA_M-pyrifera_M_contig110741.2251.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=39bp
MSSCLVTQLLEVLLIRLGLYLLNSPAVALDLVAYTGYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005578Yif1_fam