prot_M-pyrifera_M_contig110647.2239.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110647.2239.1
Unique Nameprot_M-pyrifera_M_contig110647.2239.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
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BLAST of mRNA_M-pyrifera_M_contig110647.2239.1 vs. uniprot
Match: A0A2B4RIB4_STYPI (Thioredoxin domain-containing protein 17 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RIB4_STYPI)

HSP 1 Score: 67.0 bits (162), Expect = 1.360e-11
Identity = 35/103 (33.98%), Postives = 50/103 (48.54%), Query Frame = 0 
Query:   30 VVLMLAERNEEGEYWCGDCTDADPVIRPALAALPKDTAVVECSVKRADYKDHPEYGLRTHPVAQLKGVPQLNRFQKGEDGTYTLTGPPLVEDDCKNSETVRKY 132
            +++ +   NE GE WC DC DA+PV+  AL   P D   +   V        P+   RT+P  +LK +P +  +     GT    G     +DCKNSE V K+
Sbjct:   30 IIMFIGAMNENGESWCPDCRDAEPVVEAALKKAPSDIVFILSIVGDKPEWKSPDNEFRTNPEFKLKEIPTIVDY-----GTDKRLGC----EDCKNSEIVDKF 123
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BLAST of mRNA_M-pyrifera_M_contig110647.2239.1 vs. uniprot
Match: G7DXL6_MIXOS (DUF953 domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DXL6_MIXOS)

HSP 1 Score: 55.1 bits (131), Expect = 6.300e-7
Identity = 34/108 (31.48%), Postives = 54/108 (50.00%), Query Frame = 0 
Query:   31 VLMLAERNEEG-EYWCGDCTDADPVIRPALAALPKDTAVVECSVKRADYKDHPEYGLRTHPVAQLKGVPQLNRFQ----KGEDGTYTLTGPPLVEDDCKNSETVRKYL 133
            VL L+ R+    E WCGDCT+A P+++ A    P+   ++  +  + ++KD     LR  P++ L  +P L + +     G D   +  G  L E DCK  E V  +L
Sbjct:   29 VLFLSSRDATTQEMWCGDCTEAWPILQAAFNVGPEKDCLIVWAGSKREWKDEAN-PLRALPLS-LTEIPTLIKLRAVTHSGSDSLASRIGGRLGEHDCKKVEEVIAFL 134
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BLAST of mRNA_M-pyrifera_M_contig110647.2239.1 vs. uniprot
Match: A0A1V9Y411_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y411_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.060e-5
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 0 
Query:   30 VVLMLAERNEEGEYWCGDCTDADPVIRPALAALPKDTAVVECSVKRADYKDHPEYGLRTHPVAQLKGVPQLNRFQKGEDGTYTLTGPPLVEDDCKNSETVRKYL 133
            +VLM  +R  +GEYWCGDC +AD  I  A A  P +  ++E SV             R H +  +  +P +  + KG   T  L    L+E   K+ E + +YL
Sbjct:   82 IVLMSGKR--DGEYWCGDCRNADKPISEAFAKAPSNARLLEVSVGEPAQWRQASNPFRIHRLFTVSRIPAVLEY-KGNLKTSNL----LLEKFAKDKELL-EYL 177
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110647.2239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2B4RIB4_STYPI1.360e-1133.98Thioredoxin domain-containing protein 17 n=2 Tax=P... [more]
G7DXL6_MIXOS6.300e-731.48DUF953 domain-containing protein n=1 Tax=Mixia osm... [more]
A0A1V9Y411_9STRA3.060e-532.69Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..134
e-value: 3.2E-20
score: 74.2
NoneNo IPR availablePANTHERPTHR1245242-9-9 PROTEIN-RELATEDcoord: 26..131
IPR010357Domain of unknown function DUF953, thioredoxin-likePFAMPF06110DUF953coord: 21..106
e-value: 1.4E-15
score: 56.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 9..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110647contigM-pyrifera_M_contig110647:106..516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110647.2239.1mRNA_M-pyrifera_M_contig110647.2239.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110647 106..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110647.2239.1 ID=prot_M-pyrifera_M_contig110647.2239.1|Name=mRNA_M-pyrifera_M_contig110647.2239.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
MAGSESALVKDPSGFDAAWDAACAGSSTVVVLMLAERNEEGEYWCGDCTD
ADPVIRPALAALPKDTAVVECSVKRADYKDHPEYGLRTHPVAQLKGVPQL
NRFQKGEDGTYTLTGPPLVEDDCKNSETVRKYLGLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010357DUF953_thioredox
IPR036249Thioredoxin-like_sf