prot_M-pyrifera_M_contig110639.2234.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110639.2234.1
Unique Nameprot_M-pyrifera_M_contig110639.2234.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
BLAST of mRNA_M-pyrifera_M_contig110639.2234.1 vs. uniprot
Match: A0A7S2W701_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W701_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.270e-11
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    2 AWQVGRLVLAAARLVSPPLPGVSSRCFPYVSLVDLSWQETPGFIAGATNPIFLEKGALWCDLLCNVDKGEVS 73
            A +V  LVL A+ +++  +PGV++R  PY  L DL + ETPGFIAG TNP+F      W DLLC V+  + S
Sbjct:  367 AGEVCTLVLGASSMIAAEVPGVATRIHPYAHLADLDFLETPGFIAGVTNPVF-RSHPQWWDLLCVVESSQSS 437          
BLAST of mRNA_M-pyrifera_M_contig110639.2234.1 vs. uniprot
Match: A0A7S0SW50_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SW50_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.420e-10
Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 SAWQVGRLVLAAARLVSPPLPGVSSRCFPYVSLVDLSWQETPGFIAGATNPIFLEKGALWCDLLCNVDKGEVSAV 75
            +A  + ++VL++  LVSPP+  ++ R + Y +  DLS+ E PG+IAGATNP+F +K + W DLLC +D    +A+
Sbjct:  264 AASDIAQIVLSSVALVSPPINTIT-RVYAYANFSDLSFLEVPGYIAGATNPMFQQKDSWW-DLLCILDLPNNTAI 336          
BLAST of mRNA_M-pyrifera_M_contig110639.2234.1 vs. uniprot
Match: A0A0L0DP29_THETB (UDENN domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DP29_THETB)

HSP 1 Score: 61.6 bits (148), Expect = 2.640e-9
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 AWQVGRLVLAAARLVSPPLPGVSSRCFPYVSLVDLSWQETPGFIAGATNPIFLEKGALWCDLLCNVDKGEV 72
            A +V   VL A  +VSPPLP V  R FPY +LV+L + +   F AG TN IF ++   W D+LC+++ G+V
Sbjct:  363 AGEVCDAVLGAMSMVSPPLPAVIKRTFPYTNLVNLDFLQLSSFCAGTTNLIFQQREDWW-DVLCDLETGKV 432          
BLAST of mRNA_M-pyrifera_M_contig110639.2234.1 vs. uniprot
Match: A0A6H5K009_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K009_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.840e-6
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   22 GVSSRCFPYVSLVDLSWQETPGFIAGATNPIFLEKGALWCDLLCNVD 68
            G+  R +PY SL DLS+ ETP ++AG TNP+F E    W D+LC +D
Sbjct:  296 GILHRAYPYASLSDLSFLETPSYVAGVTNPMF-ETHPEWWDVLCQLD 341          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110639.2234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2W701_9STRA1.270e-1147.22Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0SW50_9STRA7.420e-1042.67Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A0L0DP29_THETB2.640e-945.07UDENN domain-containing protein n=1 Tax=Thecamonas... [more]
A0A6H5K009_9PHAE1.840e-651.06UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08616SPAcoord: 4..73
e-value: 4.2E-13
score: 49.3
NoneNo IPR availablePANTHERPTHR28245FAMILY NOT NAMEDcoord: 4..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110639contigM-pyrifera_M_contig110639:21..251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110639.2234.1mRNA_M-pyrifera_M_contig110639.2234.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110639 21..251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110639.2234.1 ID=prot_M-pyrifera_M_contig110639.2234.1|Name=mRNA_M-pyrifera_M_contig110639.2234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
SAWQVGRLVLAAARLVSPPLPGVSSRCFPYVSLVDLSWQETPGFIAGATN
PIFLEKGALWCDLLCNVDKGEVSAVRD
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