prot_M-pyrifera_M_contig110551.2212.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110551.2212.1
Unique Nameprot_M-pyrifera_M_contig110551.2212.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length130
Homology
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BLAST of mRNA_M-pyrifera_M_contig110551.2212.1 vs. uniprot
Match: A0A812XZZ1_9DINO (SigW protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XZZ1_9DINO)

HSP 1 Score: 131 bits (329), Expect = 1.390e-33
Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = 0 
Query:    1 MQREIANALNYDKSRRQEFLDTADAINALRLD-VDVPDFAGSVLGRLDRQDRFIPASWQRIVRNSRLGLAAGLLLALVCVAGLQRVYPRLSTIGVQDTPLRDVAQAVETDADQVQQCIVDEAMQVRAALLP 130
            MQ EIA+AL YD  RR E L+TADA+ A+ LD + +PD   +VL RLD  +RFIP + +R VR  R+ +AAG+LL L+ VAGLQ VYPRL+TIG Q TP+ DVA AVE D  +V + +  +  Q+RA+L P
Sbjct:  233 MQEEIAHALQYDHERRAELLETADAVRAMNLDDIPMPDMQCAVLNRLDEHERFIPRTMRRWVRTGRMAIAAGILLGLMLVAGLQSVYPRLTTIGAQSTPVHDVATAVEQDTQRVAENVQSQVAQMRASLSP 363
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BLAST of mRNA_M-pyrifera_M_contig110551.2212.1 vs. uniprot
Match: A0A3D4UG67_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UG67_9BACT)

HSP 1 Score: 112 bits (279), Expect = 1.020e-27
Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    3 REIANALNYDKSRRQEFLDTADAINALRLDVDVPDFAGSVLGRLDRQDRFIPASWQRIVRNSRLGLAAGLLLALVCVAGLQRVYPRLSTIGVQDTPLRDVAQAVETDADQVQQCIVDEAMQVRAALLP 130
            +EI NAL YD +RRQEF DT DAI ALR+ V++PD +  VL R DR  RF+P   ++ VR  R+ +A  LL+ L+ VA LQ +YPRL+TI  Q TP+ D+  AVE D  Q+ + + +E   +R  + P
Sbjct:   42 KEIGNALQYDPARRQEFHDTRDAIEALRMPVEMPDLSDKVLQRADRHRRFLPRKLRQQVRAGRVAMAGLLLVGLMGVATLQHMYPRLTTIASQQTPVHDLQNAVEHDGAQIAEALGNEVTTIRQKVAP 169
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110551.2212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A812XZZ1_9DINO1.390e-3353.44SigW protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A3D4UG67_9BACT1.020e-2746.88Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..65
NoneNo IPR availableTMHMMTMhelixcoord: 66..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110551contigM-pyrifera_M_contig110551:187..576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110551.2212.1mRNA_M-pyrifera_M_contig110551.2212.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110551 187..597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110551.2212.1 ID=prot_M-pyrifera_M_contig110551.2212.1|Name=mRNA_M-pyrifera_M_contig110551.2212.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
MQREIANALNYDKSRRQEFLDTADAINALRLDVDVPDFAGSVLGRLDRQD
RFIPASWQRIVRNSRLGLAAGLLLALVCVAGLQRVYPRLSTIGVQDTPLR
DVAQAVETDADQVQQCIVDEAMQVRAALLP
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