prot_M-pyrifera_M_contig110198.2129.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110198.2129.1
Unique Nameprot_M-pyrifera_M_contig110198.2129.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
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BLAST of mRNA_M-pyrifera_M_contig110198.2129.1 vs. uniprot
Match: LMPC_DICDI (Lysosome membrane protein 2-C n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=LMPC_DICDI)

HSP 1 Score: 66.6 bits (161), Expect = 2.610e-10
Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 0 
Query:    8 GIDMWRFMISNGTFAVDPLYNNYVAGFANVTMFKYGSPIFFCNPHFAGVGEEYTSQVVGVAENQDWRVDWTVVDIEPTTGTVMHVNDSLQVNV----------FVNEPHWFNLYNPNVTT--GLFYP 122
            G+   R+ + N +F +DP++NN + GFAN+T    G PI+       GV  EY+S  +    NQ +      +D+EP TG  ++ N  LQ+N+          F +  +W N+++P  +   G+FYP
Sbjct:  585 GVSTQRYYLPNQSFPIDPVFNNSINGFANLTGLFNGVPIYVSLWDMYGVPIEYSSLYIN-GLNQTYENAEIPLDLEPITGNTLYYNLKLQINLQIPSNANSLWFSSLGNWTNIFSPTNSNSFGIFYP 710
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BLAST of mRNA_M-pyrifera_M_contig110198.2129.1 vs. uniprot
Match: A0A0J7K7E0_LASNI (Protein croquemort-like protein (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K7E0_LASNI)

HSP 1 Score: 50.8 bits (120), Expect = 7.720e-5
Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 0 
Query:   32 AGFANVTMFKYGSPIFFCNPHFAGVGEEYTSQVVGVAENQDWRVDWTVVDIEPTTGTVMHVNDSLQVNVFVNEPHWFNLYN--PNV 115
            +G  N+T+ +YG+P+F   PHF        + V G+  N D    +++  +EPTTG  + V+ +LQ NV ++      LYN  PN+
Sbjct:  174 SGLLNITLCRYGAPVFISLPHFHKADPAVLNAVEGLRPN-DKEHSFSIT-LEPTTGIPLEVSAALQANVHLHSSEIVGLYNNVPNI 257
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110198.2129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
LMPC_DICDI2.610e-1031.50Lysosome membrane protein 2-C n=1 Tax=Dictyosteliu... [more]
A0A0J7K7E0_LASNI7.720e-533.72Protein croquemort-like protein (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002159CD36 familyPRINTSPR01609CD36FAMILYcoord: 29..53
score: 29.66
coord: 78..99
score: 36.83
IPR002159CD36 familyPFAMPF01130CD36coord: 3..123
e-value: 9.9E-18
score: 63.9
IPR002159CD36 familyPANTHERPTHR11923SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1coord: 5..123
NoneNo IPR availablePANTHERPTHR11923:SF51EPITHELIAL MEMBRANE PROTEIN, ISOFORM Bcoord: 5..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110198contigM-pyrifera_M_contig110198:10..381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110198.2129.1mRNA_M-pyrifera_M_contig110198.2129.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110198 1..381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110198.2129.1 ID=prot_M-pyrifera_M_contig110198.2129.1|Name=mRNA_M-pyrifera_M_contig110198.2129.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
MTEVQYRGIDMWRFMISNGTFAVDPLYNNYVAGFANVTMFKYGSPIFFCN
PHFAGVGEEYTSQVVGVAENQDWRVDWTVVDIEPTTGTVMHVNDSLQVNV
FVNEPHWFNLYNPNVTTGLFYPLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002159CD36_fam