prot_M-pyrifera_M_contig110114.2116.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110114.2116.1
Unique Nameprot_M-pyrifera_M_contig110114.2116.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length193
Homology
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BLAST of mRNA_M-pyrifera_M_contig110114.2116.1 vs. uniprot
Match: A0A2G2A8T9_9RHOB (Uncharacterized protein n=1 Tax=Thalassobium sp. TaxID=2030825 RepID=A0A2G2A8T9_9RHOB)

HSP 1 Score: 55.5 bits (132), Expect = 9.290e-6
Identity = 53/205 (25.85%), Postives = 86/205 (41.95%), Query Frame = 0 
Query:    1 VNYLDNGTNLFY--PFLYPVNRLTNLFRPSGATSSQYGLTGGVRGVAEGLRFWNFWLGAEIEVNK----PFDLE--RSEYLKKAVSCNGKIFCSCFIPFMGKAI---SLRKLFPNSFFIFIDRDEEAIRKSMKRAYEENKASEWYSIYDSNIASTGSIAEKVDIQMELFSRLRK-SDLEIGNGYSEICYEDLVENASAVMTKIGQ 193
            V YL N  NL +  P    +       R      SQ+G   G+ G AEGLRFW +WLG  +        P D +  R  Y+ K +       C     ++G  +   +L   FP++ +I I RD  A   S+ R+  ++  + W+S+          + E   +  +++   R+  D E+      + YE L EN    + +I Q
Sbjct:   64 VLYLSNIWNLLFQLPLFGGIVSKVLTRRHCSEFLSQHGFVEGLDGPAEGLRFWEWWLGCGLSDESCRSMPADRKHRRVVYISKVLKVLTSQNCPFVSAYLGHTLVPDTLASSFPDAVYIRIRRDPIANALSLLRSTRQSGGT-WFSVVPQECKDEEGLNEHERVAAQVYWLNRRLDDSEVSRRSLTVHYEALCENPGRELDRIRQ 267
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110114.2116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2G2A8T9_9RHOB9.290e-625.85Uncharacterized protein n=1 Tax=Thalassobium sp. T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13469Sulfotransfer_3coord: 96..191
e-value: 4.6E-6
score: 27.2
NoneNo IPR availableGENE3D3.40.50.300coord: 86..193
e-value: 6.0E-6
score: 28.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110114contigM-pyrifera_M_contig110114:22..600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110114.2116.1mRNA_M-pyrifera_M_contig110114.2116.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110114 22..600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110114.2116.1 ID=prot_M-pyrifera_M_contig110114.2116.1|Name=mRNA_M-pyrifera_M_contig110114.2116.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
VNYLDNGTNLFYPFLYPVNRLTNLFRPSGATSSQYGLTGGVRGVAEGLRF
WNFWLGAEIEVNKPFDLERSEYLKKAVSCNGKIFCSCFIPFMGKAISLRK
LFPNSFFIFIDRDEEAIRKSMKRAYEENKASEWYSIYDSNIASTGSIAEK
VDIQMELFSRLRKSDLEIGNGYSEICYEDLVENASAVMTKIGQ
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