prot_M-pyrifera_M_contig110090.2110.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig110090.2110.1
Unique Name	prot_M-pyrifera_M_contig110090.2110.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	199

Homology

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BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A1B6JTR3_9HEMI (U6-snRNA_bdg domain-containing protein (Fragment) n=2 Tax=Bilateria TaxID=33213 RepID=A0A1B6JTR3_9HEMI)

HSP 1 Score: 370 bits (949), Expect = 1.290e-127
Identity = 168/199 (84.42%), Postives = 188/199 (94.47%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGH+LIPQSDLR+ KQTD G+THFR+G+SH+++QLIPNLYRYI PWESEF+DSQRVW EYALKRQEA  Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R EF++YQ ++QNPFWWTH RHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:   18 MGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 216

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BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: UPI000900C6A3 (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900C6A3)

HSP 1 Score: 373 bits (957), Expect = 1.520e-126
Identity = 171/199 (85.93%), Postives = 189/199 (94.97%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGHILIPQSDLRY KQTD GV+HFR+G+SHE++QLIPNLYRYI PWESEF+DSQRVW EYALKRQEA+ Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R +F++YQ ++QNPFWWTH RHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:   24 MGHILIPQSDLRYSKQTDIGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 222

[Close]

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A7S1T179_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T179_9CHLO)

HSP 1 Score: 375 bits (963), Expect = 2.030e-126
Identity = 175/199 (87.94%), Postives = 188/199 (94.47%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGHILIPQSDLRY +QTD GVTHFRAG+SHE+EQLIPNLYRYI PWESEFVDSQRVW EYALKRQEA+ Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R EF+ +Q +RQNPFWWTH RHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:  268 MGHILIPQSDLRYSQQTDLGVTHFRAGMSHEEEQLIPNLYRYIQPWESEFVDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKMFQVLRQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 466

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BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A183DN27_9BILA (Uncharacterized protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183DN27_9BILA)

HSP 1 Score: 361 bits (927), Expect = 4.530e-125
Identity = 166/200 (83.00%), Postives = 187/200 (93.50%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTG-VTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGH+LIPQSDLR++KQTD G +THFR+G++H+++QLIPNLYRYI PWE EF+DSQRVW EYALKRQEA  Q+RRLTLEDL+DSWDRGIPRINTLFQ+DRHTL +DKGWR R EF+ YQ ++QNPFWWTH RHDGKLWNLNNYRTD+IQALGGVEGILEHTLF+GTYFPTWEGLFWERASGFEE+MKFKKLTNAQRSGLNQ
Sbjct:   24 MGHVLIPQSDLRWMKQTDQGGITHFRSGMTHDEDQLIPNLYRYIQPWEFEFIDSQRVWAEYALKRQEANAQNRRLTLEDLDDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKTYQILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFWERASGFEESMKFKKLTNAQRSGLNQ 223

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BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A5E4G1M1_PRUDU (PREDICTED: pre-mRNA-processing-splicing factor n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G1M1_PRUDU)

HSP 1 Score: 368 bits (945), Expect = 9.690e-125
Identity = 167/199 (83.92%), Postives = 189/199 (94.97%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGHILIPQSDLRY +QTD GVTHFR+G++HE++QL+PNLYRYI PWESEF+DSQRVW EYA+KRQEA+ Q+RRLTLEDLEDSW+RG+PRINTLFQ+DRHTL +DKGWR R EF++YQ ++QNPFWWTH RHDGKLWNLNNYRTDVIQALGGVEGI+EHTLFKGTYFPTWEGLFWE+ASGFEE+MKFKKLTNAQRSGLNQ
Sbjct:  207 MGHILIPQSDLRYSQQTDFGVTHFRSGMNHEEDQLLPNLYRYIQPWESEFIDSQRVWAEYAMKRQEAQAQNRRLTLEDLEDSWNRGVPRINTLFQKDRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGIVEHTLFKGTYFPTWEGLFWEKASGFEESMKFKKLTNAQRSGLNQ 405

[Close]

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A7S3LJA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJA5_9STRA)

HSP 1 Score: 358 bits (918), Expect = 1.570e-123
Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTG-VTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGH+LIPQSDLR+ KQTD G VTHFR+GLSHE++QLIPNLYRYI PWE+EFVDSQRVW EYALKRQEA  Q+RRLTLEDLEDSWDRGI RINTLF +DRHTL +DKGWR R +F+KYQ  RQNPFWWTH RHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFE +M FKKLTNAQRSGLNQ
Sbjct:   10 MGHVLIPQSDLRFSKQTDGGGVTHFRSGLSHEEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIHRINTLFSKDRHTLAYDKGWRVRTDFQKYQITRQNPFWWTHTRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEYSMTFKKLTNAQRSGLNQ 209

[Close]

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: UPI00053A4250 (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A4250)

HSP 1 Score: 373 bits (957), Expect = 2.630e-123
Identity = 171/199 (85.93%), Postives = 189/199 (94.97%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGHILIPQSDLRY KQTD GV+HFR+G+SHE++QLIPNLYRYI PWESEF+DSQRVW EYALKRQEA+ Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R +F++YQ ++QNPFWWTH RHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:   24 MGHILIPQSDLRYSKQTDIGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 222

[Close]

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A7S0LS02_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS02_9EUKA)

HSP 1 Score: 369 bits (947), Expect = 9.010e-122
Identity = 169/199 (84.92%), Postives = 187/199 (93.97%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGH+LIPQSDLR+ KQTD G+THFR+G+SHE++QLIPNL+RYI PWESEFVDSQRVW EYALKRQEA  Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R +F+ YQ MRQNPFWWTH RHDGKLWNLNNYRTD+IQ+LGGVEGILEHTLFKGTYFPTWEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:  258 MGHVLIPQSDLRFSKQTDAGITHFRSGMSHEEDQLIPNLFRYIQPWESEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTQFKDYQIMRQNPFWWTHQRHDGKLWNLNNYRTDMIQSLGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 456

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BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A834Z7W1_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z7W1_9MAGN)

HSP 1 Score: 366 bits (940), Expect = 1.240e-121
Identity = 168/199 (84.42%), Postives = 187/199 (93.97%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGHILIPQSDLRY +QTD GVTHFR+G+SHE++QLIPNLYRYI PWESEF+DSQRVW EYALKRQEA+ Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL +DKGWR R +F++YQ ++QNP WWTH RHDGKLWNLNNYRTDVIQALGGVEGILEHTL KGTYFPTWEGLFWE+ASGFEE+MK++KLTNAQRSGLNQ
Sbjct:  143 MGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPLWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLCKGTYFPTWEGLFWEKASGFEESMKYEKLTNAQRSGLNQ 341

[Close]

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Match: A0A1U7LKP9_NEOID (Pre-mRNA-processing-splicing factor 8 (Fragment) n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LKP9_NEOID)

HSP 1 Score: 356 bits (913), Expect = 1.750e-121
Identity = 160/199 (80.40%), Postives = 185/199 (92.96%), Query Frame = 0

Query:    1 MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEFVDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHTLFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ 199
            MGH+LIPQSD+RY KQTD G+THFRAG+SH+++Q IPNLYRYI PWE+EF+DSQRVW EYA+KRQEA +Q+RRLTLEDLEDSWDRGIPRINTLFQ+DRHTL  DKGWR R +F++YQ ++ NPFWWT+ RHDGKLWNLN+YRTD+IQALGGVEGILEHTLFKGTYF +WEGLFWE+ASGFEE+MK+KKLTNAQRSGLNQ
Sbjct:    1 MGHVLIPQSDMRYSKQTDAGITHFRAGMSHDEDQQIPNLYRYIQPWEAEFIDSQRVWAEYAMKRQEAAQQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLIMDKGWRVRTQFKEYQLLKNNPFWWTNQRHDGKLWNLNSYRTDMIQALGGVEGILEHTLFKGTYFQSWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ 199

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig110090.2110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1B6JTR3_9HEMI	1.290e-127	84.42	U6-snRNA_bdg domain-containing protein (Fragment) ...	[more]
UPI000900C6A3	1.520e-126	85.93	pre-mRNA-processing-splicing factor 8A-like n=1 Ta...	[more]
A0A7S1T179_9CHLO	2.030e-126	87.94	Hypothetical protein (Fragment) n=1 Tax=Tetraselmi...	[more]
A0A183DN27_9BILA	4.530e-125	83.00	Uncharacterized protein n=1 Tax=Gongylonema pulchr...	[more]
A0A5E4G1M1_PRUDU	9.690e-125	83.92	PREDICTED: pre-mRNA-processing-splicing factor n=1...	[more]
A0A7S3LJA5_9STRA	1.570e-123	84.50	Hypothetical protein (Fragment) n=1 Tax=Aplanochyt...	[more]
UPI00053A4250	2.630e-123	85.93	pre-mRNA-processing-splicing factor 8A-like n=1 Ta...	[more]
A0A7S0LS02_9EUKA	9.010e-122	84.92	Hypothetical protein (Fragment) n=1 Tax=Coccolithu...	[more]
A0A834Z7W1_9MAGN	1.240e-121	84.42	Uncharacterized protein n=1 Tax=Tetracentron sinen...	[more]
A0A1U7LKP9_NEOID	1.750e-121	80.40	Pre-mRNA-processing-splicing factor 8 (Fragment) n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019580	Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding	PFAM	PF10596	U6-snRNA_bdg	coord: 113..199 e-value: 4.7E-36 score: 124.1
IPR027652	Pre-mRNA-processing-splicing factor 8	PANTHER	PTHR11140	PRE-MRNA SPLICING FACTOR PRP8	coord: 1..199
None	No IPR available	PANTHER	PTHR11140:SF1		coord: 1..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig110090	contig	M-pyrifera_M_contig110090:3..599 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig110090.2110.1	mRNA_M-pyrifera_M_contig110090.2110.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig110090 3..599 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig110090.2110.1 ID=prot_M-pyrifera_M_contig110090.2110.1|Name=mRNA_M-pyrifera_M_contig110090.2110.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp
MGHILIPQSDLRYVKQTDTGVTHFRAGLSHEDEQLIPNLYRYILPWESEF
VDSQRVWGEYALKRQEAEEQSRRLTLEDLEDSWDRGIPRINTLFQRDRHT
LFFDKGWRCRNEFEKYQKMRQNPFWWTHFRHDGKLWNLNNYRTDVIQALG
GVEGILEHTLFKGTYFPTWEGLFWERASGFEEAMKFKKLTNAQRSGLNQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019580	Prp8_U6-snRNA-bd
IPR027652	PRP8