prot_M-pyrifera_M_contig109935.2073.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109935.2073.1
Unique Nameprot_M-pyrifera_M_contig109935.2073.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length45
Homology
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: R7DJB2_9BACT (GTPase Der n=1 Tax=Tannerella sp. CAG:51 TaxID=1262979 RepID=R7DJB2_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 4.570e-11
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV 45
            +AIVGRPNVGKSTLFN L  + +AIVN +AGTTRDRQ  +V
Sbjct:    5 VAIVGRPNVGKSTLFNRLTKSRKAIVNEVAGTTRDRQYGKV 45          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: D8LH15_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH15_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 4.990e-10
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    3 FSIAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV 45
            F + IVGRPNVGKSTL+N LA   RAIV  IAGTTRDR+E+ V
Sbjct:  114 FRVVIVGRPNVGKSTLYNRLATRNRAIVTPIAGTTRDRKESTV 156          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A2N6BBP3_9HYPH (GTPase Der (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6BBP3_9HYPH)

HSP 1 Score: 60.5 bits (145), Expect = 1.040e-9
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MPFSIAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV 45
            MP ++AI+GRPNVGKSTLFN LA    A+V+   G TRDR+EAQV
Sbjct:    1 MPMTVAIIGRPNVGKSTLFNRLAGRKLALVDDTPGVTRDRREAQV 45          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A495VN57_9BACT (GTPase Der n=3 Tax=Bacteroidales TaxID=171549 RepID=A0A495VN57_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-9
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV 45
            +AIVGRPNVGKSTLFN L  + +AIVN +AGTTRDRQ  +V
Sbjct:    5 VAIVGRPNVGKSTLFNRLTKSRKAIVNEVAGTTRDRQYGKV 45          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: R5IRX3_9BACT (GTPase Der n=2 Tax=Bacteroidales TaxID=171549 RepID=R5IRX3_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 2.380e-9
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV 45
            +AIVGRPNVGKSTLFN L  + +AIVN +AGTTRDRQ  +V
Sbjct:    5 VAIVGRPNVGKSTLFNRLTKSRQAIVNEVAGTTRDRQYGKV 45          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A7C6BVP2_9BACT (GTPase Der n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7C6BVP2_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 2.380e-9
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQ 41
            +AIVGRPNVGKSTLFN L    RAIVN +AGTTRDRQ
Sbjct:    5 VAIVGRPNVGKSTLFNRLTKTRRAIVNDVAGTTRDRQ 41          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A524J4X6_9CHLR (GTP-binding protein (Fragment) n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524J4X6_9CHLR)

HSP 1 Score: 55.5 bits (132), Expect = 4.170e-9
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQ 44
            +AIVGRPNVGKSTLFN +    RA+V+ IAGTTRDR  A+
Sbjct:    6 VAIVGRPNVGKSTLFNRIVGERRAVVSDIAGTTRDRVIAE 45          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A7X7X022_9BACT (GTPase Der n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7X022_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 4.450e-9
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQ 44
            +AIVGRPNVGKSTLFN L  + RAIVN  AGTTRDRQ A+
Sbjct:    5 VAIVGRPNVGKSTLFNRLTESRRAIVNDEAGTTRDRQYAK 44          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: R6B6K9_9BACT (GTPase Der n=1 Tax=Prevotella sp. CAG:604 TaxID=1262932 RepID=R6B6K9_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 5.780e-9
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    5 IAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDR 40
            +AIVGRPNVGKSTLFN L  + RAIV+  AGTTRDR
Sbjct:    5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDR 40          
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Match: A0A4Q5VRD8_9BACT (GTP-binding protein (Fragment) n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q5VRD8_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 6.070e-9
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 MPFSIAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQ 41
            M F++AIVGRPNVGKST FN L    +AIV  I G TRDRQ
Sbjct:    1 MGFTVAIVGRPNVGKSTFFNRLLEQRKAIVEDIPGVTRDRQ 41          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109935.2073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7DJB2_9BACT4.570e-1170.73GTPase Der n=1 Tax=Tannerella sp. CAG:51 TaxID=126... [more]
D8LH15_ECTSI4.990e-1069.77GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A2N6BBP3_9HYPH1.040e-964.44GTPase Der (Fragment) n=1 Tax=Hyphomicrobiales bac... [more]
A0A495VN57_9BACT1.740e-970.73GTPase Der n=3 Tax=Bacteroidales TaxID=171549 RepI... [more]
R5IRX3_9BACT2.380e-970.73GTPase Der n=2 Tax=Bacteroidales TaxID=171549 RepI... [more]
A0A7C6BVP2_9BACT2.380e-978.38GTPase Der n=1 Tax=Bacteroidales bacterium TaxID=2... [more]
A0A524J4X6_9CHLR4.170e-967.50GTP-binding protein (Fragment) n=1 Tax=Anaerolinea... [more]
A0A7X7X022_9BACT4.450e-975.00GTPase Der n=1 Tax=Bacteroidales bacterium TaxID=2... [more]
R6B6K9_9BACT5.780e-975.00GTPase Der n=1 Tax=Prevotella sp. CAG:604 TaxID=12... [more]
A0A4Q5VRD8_9BACT6.070e-965.85GTP-binding protein (Fragment) n=1 Tax=Chitinophag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 5..45
e-value: 1.1E-13
score: 51.2
NoneNo IPR availableGENE3D3.40.50.300coord: 3..43
e-value: 7.8E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR43834FAMILY NOT NAMEDcoord: 4..44
NoneNo IPR availablePANTHERPTHR43834:SF2CLAMP-BINDING PROTEIN CRFC-RELATEDcoord: 4..44
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109935contigM-pyrifera_M_contig109935:105..239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109935.2073.1mRNA_M-pyrifera_M_contig109935.2073.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109935 105..239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109935.2073.1 ID=prot_M-pyrifera_M_contig109935.2073.1|Name=mRNA_M-pyrifera_M_contig109935.2073.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
MPFSIAIVGRPNVGKSTLFNLLAVNGRAIVNSIAGTTRDRQEAQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase