prot_M-pyrifera_M_contig109632.2018.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109632.2018.1
Unique Nameprot_M-pyrifera_M_contig109632.2018.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
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BLAST of mRNA_M-pyrifera_M_contig109632.2018.1 vs. uniprot
Match: A0A7S4HH53_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HH53_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 1.010e-11
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 0 
Query:    1 ELLDYIHFAAQNGDSTSQGDLGRVYLFGLYHEEKDYELARYYLGLAHEQEDAKATAFLGKLYEFGYGVDIDIERAADLYREASD 84
            E+L+Y+ F A   ++ S  ++G +YLFG Y +E DY +A+ Y     E  + +A A LG+LYEFG GVD D ++A + Y  A++
Sbjct:  274 EILEYVKFNANPDNAKSLVEIGILYLFGYYGQEVDYAVAKDYFEQV-EDVEPRAQAMLGRLYEFGLGVDADAQKAEEYYSRAAE 356
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109632.2018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4HH53_9EUKA1.010e-1140.48Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 15..51
e-value: 2.3
score: 17.2
coord: 52..86
e-value: 0.015
score: 24.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 53..84
e-value: 0.0041
score: 17.8
coord: 17..46
e-value: 0.0025
score: 18.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..85
e-value: 8.4E-17
score: 62.7
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 1..84
NoneNo IPR availablePANTHERPTHR11102:SF147SEL1L ERAD E3 LIGASE ADAPTOR SUBUNITcoord: 1..84
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 4..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109632contigM-pyrifera_M_contig109632:70..327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109632.2018.1mRNA_M-pyrifera_M_contig109632.2018.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109632 70..327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109632.2018.1 ID=prot_M-pyrifera_M_contig109632.2018.1|Name=mRNA_M-pyrifera_M_contig109632.2018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
ELLDYIHFAAQNGDSTSQGDLGRVYLFGLYHEEKDYELARYYLGLAHEQE
DAKATAFLGKLYEFGYGVDIDIERAADLYREASDGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf