prot_M-pyrifera_M_contig109331.1945.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109331.1945.1
Unique Nameprot_M-pyrifera_M_contig109331.1945.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: UPI001CA3BFCC (xanthine dehydrogenase family protein subunit M n=1 Tax=Sphingobium sp. PNB TaxID=863934 RepID=UPI001CA3BFCC)

HSP 1 Score: 176 bits (445), Expect = 1.300e-51
Identity = 96/169 (56.80%), Postives = 115/169 (68.05%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLLPHVFAEA 169
            G+ + A+P AD P A  AA A IE  S  GRR V A EFF  +YTTAL   E++ AVH+ AP    ++ YRK+ R++GDFA AS+AFCG F G +C  ARV VGGCG TPVRS   +A+LV  SP    +  AA  L  ACDP+DDVRGSA YRRLLVRRLLP VFA+A
Sbjct:  115 GSISLADPSADYPAALVAAEARIEIASHRGRRFVPAHEFFITYYTTALEPDEMVVAVHLAAPPGASVSAYRKVGRTEGDFATASVAFCGAFSGGQCTFARVAVGGCGDTPVRSAEANALLVGASPNSASVARAAEALVGACDPVDDVRGSADYRRLLVRRLLPRVFAQA 283          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: UPI001471050F (xanthine dehydrogenase family protein subunit M n=1 Tax=Novosphingobium naphthalenivorans TaxID=273168 RepID=UPI001471050F)

HSP 1 Score: 166 bits (421), Expect = 5.910e-48
Identity = 87/169 (51.48%), Postives = 112/169 (66.27%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLLPHVFAEA 169
            G+ +HA+P AD PTA  AA A IE  S  GRR V   EFF  +YTTAL  GE++TA+H+ AP +G ++ Y K+ R++GDFA  S+AF G F   +C  A V +GGCG  P+RS   +A+L+        +  AA  L  ACDP+DDVRGSA YRRLLVRRLLP VF++A
Sbjct:  120 GSISHADPAADYPTALVAAEAQIEIMSQNGRRLVPVHEFFISYYTTALEPGEMVTAIHLAAPPSGSVSAYCKVGRTEGDFATVSVAFSGAFVDGQCTAASVAIGGCGEAPIRSPEANALLIGAFVDSDCVAQAAEALVNACDPLDDVRGSADYRRLLVRRLLPRVFSQA 288          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A496XB99_9GAMM (Xanthine dehydrogenase family protein subunit M n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XB99_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 1.220e-39
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLL 162
            G+ +HA+P AD   A  AA A +E   + G R+V A +FF D+YTT + DGEL+TAV +PA   G + ++RK AR+DGDFA ASI+      GD C + R+ VGGCG TP+     + +LV       R+ +A   L+AACDP+DDVRGSA YR LLV RLL
Sbjct:  108 GSISHADPAADYLGALVAADARVEIAGADGVRQVPATDFFVDYYTTDVEDGELVTAVLLPAAPAGAVGIHRKFARADGDFATASISLVLALSGDVCTHLRIAVGGCGATPINVPEAEQLLVGQPLDKQRIAEAGKLLSAACDPIDDVRGSAEYRLLLVPRLL 269          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A2E7QJQ7_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QJQ7_9PROT)

HSP 1 Score: 139 bits (349), Expect = 2.860e-37
Identity = 78/162 (48.15%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLL 162
            G+ A+A+P AD PTA TA  A I+T SS G R + A +FF DF  TAL  GE++ ++ +PA     IAVY K+AR DGDFA  S+A     DG  C   ++V+GGC  TPV     D  L+ T   DT +  AAA +A ACDPMDDVR SA YR  ++ RL+
Sbjct:  109 GSIANADPAADYPTALTAVDAIIKTFSSKGERLIPAGKFFIDFMETALEPGEIVRSITIPAGPADAIAVYDKLARVDGDFATVSVAVVLTMDGSNCSFLKMVIGGCDATPVHVTEADDKLIGTDLNDTAIAKAAAIVAEACDPMDDVRASAQYRLKVLPRLI 270          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A3B9V053_9GAMM (Carbon monoxide dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B9V053_9GAMM)

HSP 1 Score: 137 bits (344), Expect = 1.630e-36
Identity = 82/169 (48.52%), Postives = 100/169 (59.17%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLLPHVFAEA 169
            G+ A A+P AD P A  A  A IE     G R V A EFF D+YTT L  GELI AV VPA   G + VY K+AR  GDF IAS+A      G+ C+  R+ +GGCGPTPV    V++ L   S  D  L  A   LA ACDP+DDVR SA YRR++V+R++     EA
Sbjct:  109 GSIAFADPAADYPPALVAVGAVIEISGPEGTREVNAHEFFVDWYTTVLTPGELIVAVRVPAMPIGSVGVYHKLARVSGDFGIASVAVVLSMLGEICQCIRIAIGGCGPTPVSLPEVESALTGQSIEDDSLHAAGKHLANACDPVDDVRASAEYRRVVVQRMVVRAVNEA 277          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A8J7SXD8_9PROT (Xanthine dehydrogenase family protein subunit M n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7SXD8_9PROT)

HSP 1 Score: 134 bits (338), Expect = 1.280e-35
Identity = 83/182 (45.60%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAA------ACDPMDDVRGSAHYRRLLVRRLLPHVFAEACAAAEAQ 176
            G+   A+P AD P A  AA A++E  ++ GRRRVAA +FF D+YTTA   GE +T V++P PR G   +Y+K+AR  GDFAIAS+A     D +   + R+ VGGCGP P+R+D  DA+L        +  DAA           A DP+DDVR SA YRRL++ RL+    A A AA EA+
Sbjct:  112 GSIGFADPAADYPPALVAANAEVEIANAAGRRRVAARDFFVDWYTTACGPGEFVTGVYLPPPRPGA-GLYKKLARVSGDFAIASVALSAAKDANGV-SIRIAVGGCGPRPIRADAADALL------SAKFGDAAXXXXXXXXXXXAADPVDDVRASAEYRRLVIPRLVAETVAHARAALEAR 285          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A2E7QLD8_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QLD8_9PROT)

HSP 1 Score: 134 bits (338), Expect = 1.510e-35
Identity = 74/169 (43.79%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLLPHVFAEA 169
            G+ +HA+P AD P+A  A  ADIE   S GRR V A EFF D+Y TAL  GEL+TA  +P    G   VY K+A+  GD  IA +A     DGD C +  + VGGCGP PVR    +  L+  +  +  + +    L+ A DP+DDVR SA +RRLL+ R++   F+ A
Sbjct:  118 GSVSHADPAADYPSALAAVGADIEIAGSHGRRTVPATEFFTDWYETALQSGELVTAAILPPVPPGSAGVYEKLAKVKGDLGIAMVAMVLAMDGDTCSHLSIAVGGCGPAPVRLPDAEKSLLGGALSEAGIRELGQALSEATDPVDDVRASADFRRLLIPRMVARAFSTA 286          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A5J6MP58_9PROT (FAD-binding PCMH-type domain-containing protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MP58_9PROT)

HSP 1 Score: 131 bits (330), Expect = 1.990e-34
Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLL 162
            G+ A A+P AD P A  AA A+IE    GG RR+ AAEFF D+Y TAL  GEL+ A+H+PA     I  Y K+AR +GD+A AS+A      G  C    + VG CGP PVR    +  L+ +   D  L  A   LA A DP+DDVR SA YRRL++ RL+
Sbjct:  112 GSIAFADPGADYPPALVAADAEIELLGGGGTRRLKAAEFFTDWYQTALEPGELVAAIHLPAGDARAIGHYDKLARVEGDYATASVAVVLTLAGGICTGIAIAVGACGPKPVRLAEAERKLIGSELDDASLAAAGVLLADAADPVDDVRASADYRRLVIPRLV 273          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A1F4AKU4_9PROT (FAD-binding PCMH-type domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AKU4_9PROT)

HSP 1 Score: 130 bits (328), Expect = 3.770e-34
Identity = 78/169 (46.15%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLLPHVFAEA 169
            G  AHA+P  D P A  AA A IE    GGRR+++A EFF D+Y TAL  GE+++AVH+PA R G + +Y K+AR  GD+A  S+A     DG+   + RV +GGCGPTP+  + V+ +L    P    L  A   L  A DP+DDVRGSA YR +L+ R+L   + EA
Sbjct:  111 GAVAHADPGLDYPPALIAADAKIEIAGPGGRRQLSAQEFFVDWYATALQPGEMVSAVHLPAARPG-VGLYHKLARVSGDYATVSVALTMAHDGEAI-DTRVAIGGCGPTPLMIEEVNRLLSG-RPSAQDLRRAGELLQDAADPVDDVRGSAEYRLMLIPRMLARAYDEA 276          
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Match: A0A653JTI0_9BURK (Carbon-monoxide dehydrogenase medium subunit n=1 Tax=Burkholderiales bacterium 8X TaxID=2653183 RepID=A0A653JTI0_9BURK)

HSP 1 Score: 129 bits (325), Expect = 1.130e-33
Identity = 84/162 (51.85%), Postives = 99/162 (61.11%), Query Frame = 0
Query:    1 GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALADGELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNARVVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGSAHYRRLLVRRLL 162
            G+ + A+P  D P A  AA A IE   SGGRR V+AA FF D+Y TAL  GEL++AV +PAP  G   VY K AR  GD+A AS+A C V DG      RV VG CGPTP+RSD  DA+L      D  +  A   L    DP+DDVRGSA YRR L+ RLL
Sbjct:  114 GSISFADPGLDYPPALVAAGATIELAGSGGRRSVSAAAFFVDWYLTALEPGELVSAVILPAPDRGA-GVYIKHARVAGDYATASVAACLVPDGAM----RVAVGACGPTPLRSDEADALLAGDK-SDAAIARAGELLVELADPLDDVRGSADYRRRLIPRLL 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109331.1945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CA3BFCC1.300e-5156.80xanthine dehydrogenase family protein subunit M n=... [more]
UPI001471050F5.910e-4851.48xanthine dehydrogenase family protein subunit M n=... [more]
A0A496XB99_9GAMM1.220e-3948.77Xanthine dehydrogenase family protein subunit M n=... [more]
A0A2E7QJQ7_9PROT2.860e-3748.15Carbon monoxide dehydrogenase n=1 Tax=Rhodospirill... [more]
A0A3B9V053_9GAMM1.630e-3648.52Carbon monoxide dehydrogenase n=1 Tax=Gammaproteob... [more]
A0A8J7SXD8_9PROT1.280e-3545.60Xanthine dehydrogenase family protein subunit M n=... [more]
A0A2E7QLD8_9PROT1.510e-3543.79Carbon monoxide dehydrogenase n=1 Tax=Rhodospirill... [more]
A0A5J6MP58_9PROT1.990e-3446.91FAD-binding PCMH-type domain-containing protein n=... [more]
A0A1F4AKU4_9PROT3.770e-3446.15FAD-binding PCMH-type domain-containing protein n=... [more]
A0A653JTI0_9BURK1.130e-3351.85Carbon-monoxide dehydrogenase medium subunit n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005107CO dehydrogenase flavoprotein, C-terminalSMARTSM01092CO_deh_flav_C_2coord: 68..169
e-value: 2.8E-23
score: 93.3
IPR005107CO dehydrogenase flavoprotein, C-terminalPFAMPF03450CO_deh_flav_Ccoord: 69..168
e-value: 1.4E-20
score: 73.4
NoneNo IPR availableGENE3D3.30.390.50coord: 68..177
e-value: 1.2E-27
score: 98.0
NoneNo IPR availablePANTHERPTHR42659FAMILY NOT NAMEDcoord: 4..172
IPR002346Molybdopterin dehydrogenase, FAD-bindingPFAMPF00941FAD_binding_5coord: 4..61
e-value: 5.1E-11
score: 42.6
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 1..62
e-value: 4.4E-13
score: 51.1
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 1..64
score: 8.801
IPR036683CO dehydrogenase flavoprotein, C-terminal domain superfamilySUPERFAMILY55447CO dehydrogenase flavoprotein C-terminal domain-likecoord: 67..169
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 4..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109331contigM-pyrifera_M_contig109331:2..535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109331.1945.1mRNA_M-pyrifera_M_contig109331.1945.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109331 2..535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109331.1945.1 ID=prot_M-pyrifera_M_contig109331.1945.1|Name=mRNA_M-pyrifera_M_contig109331.1945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
GTRAHAEPVADDPTAATAACADIETHSSGGRRRVAAAEFFEDFYTTALAD
GELITAVHVPAPRTGGIAVYRKIARSDGDFAIASIAFCGVFDGDRCRNAR
VVVGGCGPTPVRSDTVDAMLVDTSPGDTRLTDAAATLAAACDPMDDVRGS
AHYRRLLVRRLLPHVFAEACAAAEAQRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005107CO_DH_flav_C
IPR002346Mopterin_DH_FAD-bd
IPR016169FAD-bd_PCMH_sub2
IPR016166FAD-bd_PCMH
IPR036683CO_DH_flav_C_dom_sf
IPR036318FAD-bd_PCMH-like_sf