prot_M-pyrifera_M_contig108876.1863.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108876.1863.1
Unique Nameprot_M-pyrifera_M_contig108876.1863.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length153
Homology
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BLAST of mRNA_M-pyrifera_M_contig108876.1863.1 vs. uniprot
Match: UPI001187CA2B (redoxin domain-containing protein n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=UPI001187CA2B)

HSP 1 Score: 144 bits (362), Expect = 6.570e-37
Identity = 66/117 (56.41%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    2 DRHKKHFDYRRDWDWKPAGLAQGHVTIPADAKVKLTLRADGARDMSWVKKLQPDDFYEVFIYPHPANANSYPFGDAHAKHLGHFSGLRNLALGYVQVTDQGMQHLESMTSLEFLSIY 118
            D++ K FDYRRDWDWK    AQG VT+PA A VKL L+  GA +MSWV++L+PDD YE  +YPH ++ N + FGDA  +HLGH +GLR L L YVQVT +G++ L  + SLE L+IY
Sbjct:  418 DQYSKAFDYRRDWDWKYTRQAQGDVTVPAGAVVKLNLKQPGAGNMSWVERLEPDDIYEFRVYPHASSPNPFKFGDAQVRHLGHLTGLRELELNYVQVTGRGLRALAPLQSLEKLTIY 534
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BLAST of mRNA_M-pyrifera_M_contig108876.1863.1 vs. uniprot
Match: A0A517ZN01_9PLAN (Thiol-disulfide oxidoreductase ResA n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZN01_9PLAN)

HSP 1 Score: 139 bits (349), Expect = 3.690e-35
Identity = 67/150 (44.67%), Postives = 85/150 (56.67%), Query Frame = 0 
Query:    2 DRHKKHFDYRRDWDWKPAGLAQGHVTIPADAKVKLTLRADGARDMSWVKKLQPDDFYEVFIYPHPANANSYPFGDAHAKHLGHFSGLRNLALGYVQVTDQGMQHLESMTSLEFLSIYXXXXXXXXXXXXXXXXXXXRLELSKMKWTDIGV 151
            D + K FDYRRDWDWK  G AQG V IP  A+VKL ++  GA + SW+  L PDD YEVF+YP P N +SY FG+A A+HLGH +GL  L + Y  VT  G++ L+ +  LE L  +                    L L K KW D G+
Sbjct:  418 DTYFKRFDYRRDWDWKYLGQAQGAVEIPPGAQVKLEIKKAGAANTSWITNLHPDDLYEVFVYPEPGNGDSYRFGNAQARHLGHLTGLTELTIQYTHVTGPGLRALKPLRKLEKLMYFSEQADNDSLRSIGELTSLETLSLGKAKWDDAGL 567
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BLAST of mRNA_M-pyrifera_M_contig108876.1863.1 vs. uniprot
Match: A0A518CUJ7_9PLAN (Leucine Rich repeats (2 copies) n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CUJ7_9PLAN)

HSP 1 Score: 62.0 bits (149), Expect = 2.730e-8
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 0 
Query:   16 WKPAGLAQGHVTIPADAKVKLTLRADGARDMSWVKKLQPDDFYEVFIYPHPANANSYPFGDAHAKHLGHFSGLRNLALGYVQVT 99
            W   G AQG V++P DA +KL +    AR+++W+  L+PDD +E  + P     +    GD   +HL H +GL  L L +V V+
Sbjct:   71 WNLVGEAQGDVSVPVDAIIKLQVNVGTARNLAWISHLKPDDLFEFELSP-LLPQHQLRVGDNDVRHLRHLTGLTCLQLYHVDVS 153
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108876.1863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001187CA2B6.570e-3756.41redoxin domain-containing protein n=1 Tax=Symmachi... [more]
A0A517ZN01_9PLAN3.690e-3544.67Thiol-disulfide oxidoreductase ResA n=1 Tax=Symmac... [more]
A0A518CUJ7_9PLAN2.730e-836.90Leucine Rich repeats (2 copies) n=1 Tax=Polystyren... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 67..153
e-value: 8.5E-12
score: 46.1
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 74..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108876contigM-pyrifera_M_contig108876:4..462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108876.1863.1mRNA_M-pyrifera_M_contig108876.1863.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108876 4..462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108876.1863.1 ID=prot_M-pyrifera_M_contig108876.1863.1|Name=mRNA_M-pyrifera_M_contig108876.1863.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
MDRHKKHFDYRRDWDWKPAGLAQGHVTIPADAKVKLTLRADGARDMSWVK
KLQPDDFYEVFIYPHPANANSYPFGDAHAKHLGHFSGLRNLALGYVQVTD
QGMQHLESMTSLEFLSIYSPEMGNGGLKSIGKLTSLERLELSKMKWTDIG
VLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf