prot_M-pyrifera_M_contig108853.1855.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108853.1855.1
Unique Nameprot_M-pyrifera_M_contig108853.1855.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length35
Homology
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: A0A139AA01_GONPJ (H/ACA ribonucleoprotein complex subunit NOP10 n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AA01_GONPJ)

HSP 1 Score: 65.1 bits (157), Expect = 3.860e-13
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            MHLMYY D+ G+RVYTLKKTAPDGSPTKSAHP +
Sbjct:    1 MHLMYYTDTNGQRVYTLKKTAPDGSPTKSAHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: C1EE84_MICCC (Nucleolar protein 10 n=2 Tax=Micromonas TaxID=38832 RepID=C1EE84_MICCC)

HSP 1 Score: 62.8 bits (151), Expect = 3.170e-12
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            M+LMYYLD +G RVYTLKKTAPDGSPT+SAHP +
Sbjct:    1 MYLMYYLDEKGNRVYTLKKTAPDGSPTQSAHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: I0YSD0_COCSC (Nucleolar protein 10 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YSD0_COCSC)

HSP 1 Score: 62.0 bits (149), Expect = 6.400e-12
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            M+LMYYLD  GKR+YTL+KTAPDGSPT+SAHP +
Sbjct:    1 MYLMYYLDDAGKRIYTLQKTAPDGSPTQSAHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: B6JW00_SCHJY (H/ACA ribonucleoprotein complex subunit NOP10 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JW00_SCHJY)

HSP 1 Score: 60.5 bits (145), Expect = 2.610e-11
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            MHLMYYL+ EGKRVYTLKK APDG PT S+HP +
Sbjct:    1 MHLMYYLNDEGKRVYTLKKFAPDGKPTHSSHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: W7TTE0_9STRA (Nucleolar protein 10 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTE0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.050e-11
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            MHLMYYL+ EGKRVYTLKK APDG  T SAHPGK
Sbjct:    1 MHLMYYLNGEGKRVYTLKKEAPDGQITYSAHPGK 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: A0A0L0HHH4_SPIPD (H/ACA ribonucleoprotein complex subunit NOP10 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HHH4_SPIPD)

HSP 1 Score: 59.3 bits (142), Expect = 7.660e-11
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            MHLMYYLD  GKRVYTLKK  P+GS TKSAHP +
Sbjct:    1 MHLMYYLDESGKRVYTLKKLTPEGSVTKSAHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: K8F2J5_9CHLO (Nucleolar protein 10 n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F2J5_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 1.060e-10
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            M+LMYYL+ +GKRVYTLKKT PDG PT SAHP +
Sbjct:    1 MYLMYYLNEDGKRVYTLKKTGPDGKPTLSAHPAR 34          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: A0A090M6W0_OSTTA (Nucleolar protein 10 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M6W0_OSTTA)

HSP 1 Score: 59.3 bits (142), Expect = 1.310e-10
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            M+LMYY D +G+RVYTLKKTAPDG+PT SAHP +
Sbjct:   24 MYLMYYTDEKGERVYTLKKTAPDGTPTHSAHPAR 57          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: A0A1X7VCA6_AMPQE (Nucleolar protein 10 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VCA6_AMPQE)

HSP 1 Score: 59.7 bits (143), Expect = 1.320e-10
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            M+LMYYLD EGKR+YTLKK  PDG+PT SAHP +
Sbjct:   39 MYLMYYLDKEGKRIYTLKKIGPDGTPTLSAHPAR 72          
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Match: NOP10_SCHPO (H/ACA ribonucleoprotein complex subunit nop10 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=NOP10_SCHPO)

HSP 1 Score: 58.5 bits (140), Expect = 1.510e-10
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK 34
            MHLMYYL+ EGKRVYTLKK +PDG  TKS+HP +
Sbjct:    1 MHLMYYLNDEGKRVYTLKKVSPDGRVTKSSHPAR 34          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108853.1855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A139AA01_GONPJ3.860e-1382.35H/ACA ribonucleoprotein complex subunit NOP10 n=1 ... [more]
C1EE84_MICCC3.170e-1279.41Nucleolar protein 10 n=2 Tax=Micromonas TaxID=3883... [more]
I0YSD0_COCSC6.400e-1276.47Nucleolar protein 10 n=2 Tax=Coccomyxa TaxID=41891... [more]
B6JW00_SCHJY2.610e-1176.47H/ACA ribonucleoprotein complex subunit NOP10 n=1 ... [more]
W7TTE0_9STRA5.050e-1182.35Nucleolar protein 10 n=1 Tax=Nannochloropsis gadit... [more]
A0A0L0HHH4_SPIPD7.660e-1176.47H/ACA ribonucleoprotein complex subunit NOP10 n=2 ... [more]
K8F2J5_9CHLO1.060e-1073.53Nucleolar protein 10 n=1 Tax=Bathycoccus prasinos ... [more]
A0A090M6W0_OSTTA1.310e-1073.53Nucleolar protein 10 n=1 Tax=Ostreococcus tauri Ta... [more]
A0A1X7VCA6_AMPQE1.320e-1073.53Nucleolar protein 10 n=1 Tax=Amphimedon queensland... [more]
NOP10_SCHPO1.510e-1073.53H/ACA ribonucleoprotein complex subunit nop10 n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 3..33
e-value: 1.6E-10
score: 40.9
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..33
NoneNo IPR availablePANTHERPTHR13305:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 3coord: 1..33
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 2..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108853contigM-pyrifera_M_contig108853:71..175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108853.1855.1mRNA_M-pyrifera_M_contig108853.1855.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108853 71..175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108853.1855.1 ID=prot_M-pyrifera_M_contig108853.1855.1|Name=mRNA_M-pyrifera_M_contig108853.1855.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=35bp
MHLMYYLDSEGKRVYTLKKTAPDGSPTKSAHPGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007264H/ACA_rnp_Nop10
IPR036756H/ACA_rnp_Nop10_sf