prot_M-pyrifera_M_contig108738.1838.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108738.1838.1
Unique Nameprot_M-pyrifera_M_contig108738.1838.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
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BLAST of mRNA_M-pyrifera_M_contig108738.1838.1 vs. uniprot
Match: A0A1H6ZXF7_9BACT (Uncharacterized protein n=2 Tax=Cyclobacterium xiamenense TaxID=1297121 RepID=A0A1H6ZXF7_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.560e-6
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 0 
Query:   15 FGSFQSIQLLSNADGDLYLVGFHTSRDGE--ELADLFAVDLRQSPEKTLRKIASRTITLSEDNHFRYAAGLWI-DGDRLRLLASERNLETTTRLTV 107
            + S+Q+I L ++    LYLVG  T RDGE  ++ DLF +   +SP  +LRK+AS+     E   F+ AAGL I  G  L LL +   LE  TR+ V
Sbjct:  225 WNSYQNINLFTDQQERLYLVG--TGRDGEGNQVGDLFELQTEESP-PSLRKLASKVFHPGEPVDFKAAAGLVIGSGGSLELLGAPYQLEGRTRIDV 317
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108738.1838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1H6ZXF7_9BACT1.560e-641.67Uncharacterized protein n=2 Tax=Cyclobacterium xia... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108738contigM-pyrifera_M_contig108738:56..385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108738.1838.1mRNA_M-pyrifera_M_contig108738.1838.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108738 56..385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108738.1838.1 ID=prot_M-pyrifera_M_contig108738.1838.1|Name=mRNA_M-pyrifera_M_contig108738.1838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
ASTAATTDWALSRLFGSFQSIQLLSNADGDLYLVGFHTSRDGEELADLFA
VDLRQSPEKTLRKIASRTITLSEDNHFRYAAGLWIDGDRLRLLASERNLE
TTTRLTVTP*
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