prot_M-pyrifera_M_contig108042.1711.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108042.1711.1
Unique Nameprot_M-pyrifera_M_contig108042.1711.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
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BLAST of mRNA_M-pyrifera_M_contig108042.1711.1 vs. uniprot
Match: A9V6M3_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6M3_MONBE)

HSP 1 Score: 52.4 bits (124), Expect = 4.920e-6
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0 
Query:   17 AKSKWAVFF-REDPSLASEIVSLGKANGEAGHWAVVTLQDTTYYVAGSKNVH 67
            A   W  FF  ED + A  ++ + KANGEAGH AVV  QD    +AGSKNVH
Sbjct:  167 AAVNWRRFFIGEDAASARHVICMDKANGEAGHVAVVRTQDAYVLLAGSKNVH 218
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BLAST of mRNA_M-pyrifera_M_contig108042.1711.1 vs. uniprot
Match: A0A1D1VWU4_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VWU4_RAMVA)

HSP 1 Score: 49.3 bits (116), Expect = 6.020e-5
Identity = 21/55 (38.18%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:   20 KWAVFFREDPSLASEIVSLGKANGEAGHWAVVTLQDTTYYVAGSKNVHCVWEKKQ 74
            K+  +F +    A  ++   K NGEA H+AV  ++D  Y +AGSKNVH ++ K++
Sbjct:  150 KYEKYFNQPIENAERVICTRKMNGEAAHFAVRWMEDDFYIIAGSKNVHLLFRKRE 204
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108042.1711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A9V6M3_MONBE4.920e-651.92Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1D1VWU4_RAMVA6.020e-538.18Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108042contigM-pyrifera_M_contig108042:363..596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108042.1711.1mRNA_M-pyrifera_M_contig108042.1711.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108042 363..596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108042.1711.1 ID=prot_M-pyrifera_M_contig108042.1711.1|Name=mRNA_M-pyrifera_M_contig108042.1711.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
LPSEGEGVGAVKGESDAKSKWAVFFREDPSLASEIVSLGKANGEAGHWAV
VTLQDTTYYVAGSKNVHCVWEKKQGKKR
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