prot_M-pyrifera_M_contig107882.1674.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107882.1674.1
Unique Nameprot_M-pyrifera_M_contig107882.1674.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length81
Homology
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 62.0 bits (149), Expect = 2.150e-9
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPI-YLVAGEKLTTSG-VTRSMSIVPESQL 81
            MA++E Y ENL+++V+DE + VT++WL+ +LSV  N AK+ML+ +  +++     + YLV GE+    G V + +S+V  +QL
Sbjct:    1 MAMDELYLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMKKLSLVRGNQL 83          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001471FFAF (DNA polymerase delta subunit 3-like n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471FFAF)

HSP 1 Score: 58.2 bits (139), Expect = 2.490e-9
Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    3 VEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCD--REQDVAE--PIYLVAGEKLTTSGVTRSMSIVPESQL 81
            ++E Y +N+ ++V D+ + VT++WL+ +L V  NTAK+MLF + D  R++  A+    YLV+G+ +     +  +S+V E QL
Sbjct:    1 MDELYLDNIDEFVNDDNKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESAAQLHATYLVSGKFMENGQASHKVSVVREEQL 83          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001EE61B35 (LOW QUALITY PROTEIN: DNA polymerase delta subunit 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61B35)

HSP 1 Score: 61.6 bits (148), Expect = 3.030e-9
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ-----DVAEPIYLVAGEKLTTSG-VTRSMSIVPESQL 81
            MAV+E Y ENL ++V DE + VTF+WL+ +L V  N AK+ML+AF  +E+     D     Y VAG   T +G +     +V E +L
Sbjct:    1 MAVDEYYMENLDEFVNDENKVVTFKWLSTNLKVHVNQAKQMLYAFVQQERNKKDNDKLTVTYFVAGTPKTKNGFMGHKCCVVAEEEL 87          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI00201EB9D2 (DNA polymerase delta subunit 3-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EB9D2)

HSP 1 Score: 61.6 bits (148), Expect = 3.040e-9
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ-----DVAEPIYLVAGEKLTTSG-VTRSMSIVPESQL 81
            MAV+E Y ENL ++V DE + VTF+WL+ +L V  N AK+ML+AF  +E+     D     Y VAG   T +G +     IV E +L
Sbjct:   12 MAVDEYYMENLDEFVNDENKVVTFKWLSTNLKVHVNQAKQMLYAFVQQERNKRDNDKLSVTYFVAGIPKTKNGFMGHKCCIVSEEEL 98          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI0020266277 (DNA polymerase delta subunit 3-like n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020266277)

HSP 1 Score: 56.6 bits (135), Expect = 3.250e-8
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    4 EEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDV-----AEPIYLVAGEKLTTSGVTRSMSIVPESQL 81
            +E Y EN+ ++V D+ R VT++WL+ +L V  N AK+ML+ + +R++          +YLVAG  +    V   +++V E QL
Sbjct:    3 DELYLENIDEFVTDQNRVVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVVYLVAGNLVQNGHVLHKVAVVREDQL 85          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: V4AGV2_LOTGI (DNA polymerase delta subunit 3 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AGV2_LOTGI)

HSP 1 Score: 58.5 bits (140), Expect = 3.680e-8
Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    7 YFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEP----IYLVAGEKLTTSGVTRSMS-IVPESQL 81
            Y ENL ++V DE + VT++WL+C+L +  N AKR+L+ F  +E++  +      Y VAG+    +G  + +  +VPE++L
Sbjct:   11 YLENLDEYVNDENKIVTYKWLSCTLQIHVNLAKRLLYLFLQQERNEKDNDLSVTYFVAGQHKDNNGNQKHICCVVPETEL 90          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9)

HSP 1 Score: 58.5 bits (140), Expect = 3.690e-8
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ----DVAEPIYLVAGEKLTTSGVTRSM----SIVPESQL 81
            M+ +E Y +NL ++V DE R VT++WL+  L+V  N AKRMLFAFC++++    D     Y VAG   T +G+        ++V E QL
Sbjct:    1 MSGDELYLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGS--TAAGMHSPQEYKCAVVSEEQL 87          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6J1SN40_FRAOC (DNA polymerase delta subunit 3 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SN40_FRAOC)

HSP 1 Score: 58.5 bits (140), Expect = 3.720e-8
Identity = 25/65 (38.46%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    4 EEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPIYLVAGEKLTTSG 68
            EE Y +NL ++V+DE + VT++WL+ +L++  N +K++L+ FC  ++D+    +L+AG KL  +G
Sbjct:   21 EEMYLQNLEEFVMDEDKIVTYKWLSKTLNIHVNQSKQLLYTFCKDKKDLVSATFLIAG-KLRCNG 84          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6L2PFQ4_COPFO (DNA polymerase delta subunit 3 n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PFQ4_COPFO)

HSP 1 Score: 55.8 bits (133), Expect = 4.750e-8
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    7 YFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPIYLVAGEKLTTSGVTRSMSIVPESQL 81
            Y +N+ ++V+DE + VT++WL+  L +  NTAK++L+ F  ++++     YLV G  +   G    + IVPE  L
Sbjct:    9 YLQNIEEYVMDEDKIVTYKWLSKDLGIHVNTAKQLLYTFATKQKNSVCLTYLVGG--VLCDGTGCKIQIVPEEDL 81          
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6J2RH13_COTGO (DNA polymerase delta subunit 3 n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2RH13_COTGO)

HSP 1 Score: 57.8 bits (138), Expect = 6.890e-8
Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    3 VEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCD--REQDVAE--PIYLVAGEKLTTSGVTRSMSIVPESQL 81
            ++E Y +N+ ++V D+ + VT++WL+ +L V  NTAK+MLF + D  R++  A+    YLV+G+ +     +  +S+V E QL
Sbjct:    1 MDELYLDNIDEFVNDQDKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESSAQLHATYLVSGKSVDKGQTSHKVSVVKEEQL 83          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0001CB96C32.150e-939.76DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
UPI001471FFAF2.490e-936.14DNA polymerase delta subunit 3-like n=1 Tax=Thalas... [more]
UPI001EE61B353.030e-941.38LOW QUALITY PROTEIN: DNA polymerase delta subunit ... [more]
UPI00201EB9D23.040e-942.53DNA polymerase delta subunit 3-like n=1 Tax=Haliot... [more]
UPI00202662773.250e-834.94DNA polymerase delta subunit 3-like n=1 Tax=Sphaer... [more]
V4AGV2_LOTGI3.680e-836.25DNA polymerase delta subunit 3 n=1 Tax=Lottia giga... [more]
UPI001B88DBF93.690e-840.45DNA polymerase delta subunit 3-like isoform X1 n=2... [more]
A0A6J1SN40_FRAOC3.720e-838.46DNA polymerase delta subunit 3 n=1 Tax=Frankliniel... [more]
A0A6L2PFQ4_COPFO4.750e-834.67DNA polymerase delta subunit 3 n=1 Tax=Coptotermes... [more]
A0A6J2RH13_COTGO6.890e-836.14DNA polymerase delta subunit 3 n=1 Tax=Cottoperca ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041913DNA polymerase delta subunit 3 superfamilyGENE3D1.10.10.1300coord: 2..81
e-value: 1.3E-18
score: 69.4
IPR019038DNA polymerase delta subunit 3PFAMPF09507CDC27coord: 20..81
e-value: 2.0E-8
score: 34.1
IPR019038DNA polymerase delta subunit 3PANTHERPTHR17598FAMILY NOT NAMEDcoord: 4..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107882contigM-pyrifera_M_contig107882:310..612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107882.1674.1mRNA_M-pyrifera_M_contig107882.1674.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107882 310..612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107882.1674.1 ID=prot_M-pyrifera_M_contig107882.1674.1|Name=mRNA_M-pyrifera_M_contig107882.1674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ
DVAEPIYLVAGEKLTTSGVTRSMSIVPESQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041913POLD3_sf
IPR019038POLD3