mRNA_M-pyrifera_M_contig107882.1674.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3) HSP 1 Score: 62.0 bits (149), Expect = 2.150e-9 Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPI-YLVAGEKLTTSG-VTRSMSIVPESQL 243 MA++E Y ENL+++V+DE + VT++WL+ +LSV N AK+ML+ + +++ + YLV GE+ G V + +S+V +QL Sbjct: 1 MAMDELYLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMKKLSLVRGNQL 83
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001471FFAF (DNA polymerase delta subunit 3-like n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471FFAF) HSP 1 Score: 58.2 bits (139), Expect = 2.490e-9 Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 7 VEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCD--REQDVAE--PIYLVAGEKLTTSGVTRSMSIVPESQL 243 ++E Y +N+ ++V D+ + VT++WL+ +L V NTAK+MLF + D R++ A+ YLV+G+ + + +S+V E QL Sbjct: 1 MDELYLDNIDEFVNDDNKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESAAQLHATYLVSGKFMENGQASHKVSVVREEQL 83
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001EE61B35 (LOW QUALITY PROTEIN: DNA polymerase delta subunit 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61B35) HSP 1 Score: 61.6 bits (148), Expect = 3.030e-9 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ-----DVAEPIYLVAGEKLTTSG-VTRSMSIVPESQL 243 MAV+E Y ENL ++V DE + VTF+WL+ +L V N AK+ML+AF +E+ D Y VAG T +G + +V E +L Sbjct: 1 MAVDEYYMENLDEFVNDENKVVTFKWLSTNLKVHVNQAKQMLYAFVQQERNKKDNDKLTVTYFVAGTPKTKNGFMGHKCCVVAEEEL 87
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI00201EB9D2 (DNA polymerase delta subunit 3-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EB9D2) HSP 1 Score: 61.6 bits (148), Expect = 3.040e-9 Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ-----DVAEPIYLVAGEKLTTSG-VTRSMSIVPESQL 243 MAV+E Y ENL ++V DE + VTF+WL+ +L V N AK+ML+AF +E+ D Y VAG T +G + IV E +L Sbjct: 12 MAVDEYYMENLDEFVNDENKVVTFKWLSTNLKVHVNQAKQMLYAFVQQERNKRDNDKLSVTYFVAGIPKTKNGFMGHKCCIVSEEEL 98
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI0020266277 (DNA polymerase delta subunit 3-like n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020266277) HSP 1 Score: 56.6 bits (135), Expect = 3.250e-8 Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 10 EEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDV-----AEPIYLVAGEKLTTSGVTRSMSIVPESQL 243 +E Y EN+ ++V D+ R VT++WL+ +L V N AK+ML+ + +R++ +YLVAG + V +++V E QL Sbjct: 3 DELYLENIDEFVTDQNRVVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVVYLVAGNLVQNGHVLHKVAVVREDQL 85
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: V4AGV2_LOTGI (DNA polymerase delta subunit 3 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AGV2_LOTGI) HSP 1 Score: 58.5 bits (140), Expect = 3.680e-8 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 19 YFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEP----IYLVAGEKLTTSGVTRSMS-IVPESQL 243 Y ENL ++V DE + VT++WL+C+L + N AKR+L+ F +E++ + Y VAG+ +G + + +VPE++L Sbjct: 11 YLENLDEYVNDENKIVTYKWLSCTLQIHVNLAKRLLYLFLQQERNEKDNDLSVTYFVAGQHKDNNGNQKHICCVVPETEL 90
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9) HSP 1 Score: 58.5 bits (140), Expect = 3.690e-8 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQ----DVAEPIYLVAGEKLTTSGVTRSM----SIVPESQL 243 M+ +E Y +NL ++V DE R VT++WL+ L+V N AKRMLFAFC++++ D Y VAG T +G+ ++V E QL Sbjct: 1 MSGDELYLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGS--TAAGMHSPQEYKCAVVSEEQL 87
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6J1SN40_FRAOC (DNA polymerase delta subunit 3 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SN40_FRAOC) HSP 1 Score: 58.5 bits (140), Expect = 3.720e-8 Identity = 25/65 (38.46%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 10 EEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPIYLVAGEKLTTSG 204 EE Y +NL ++V+DE + VT++WL+ +L++ N +K++L+ FC ++D+ +L+AG KL +G Sbjct: 21 EEMYLQNLEEFVMDEDKIVTYKWLSKTLNIHVNQSKQLLYTFCKDKKDLVSATFLIAG-KLRCNG 84
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6L2PFQ4_COPFO (DNA polymerase delta subunit 3 n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PFQ4_COPFO) HSP 1 Score: 55.8 bits (133), Expect = 4.750e-8 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 19 YFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQDVAEPIYLVAGEKLTTSGVTRSMSIVPESQL 243 Y +N+ ++V+DE + VT++WL+ L + NTAK++L+ F ++++ YLV G + G + IVPE L Sbjct: 9 YLQNIEEYVMDEDKIVTYKWLSKDLGIHVNTAKQLLYTFATKQKNSVCLTYLVGG--VLCDGTGCKIQIVPEEDL 81
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Match: A0A6J2RH13_COTGO (DNA polymerase delta subunit 3 n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2RH13_COTGO) HSP 1 Score: 57.8 bits (138), Expect = 6.890e-8 Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 7 VEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCD--REQDVAE--PIYLVAGEKLTTSGVTRSMSIVPESQL 243 ++E Y +N+ ++V D+ + VT++WL+ +L V NTAK+MLF + D R++ A+ YLV+G+ + + +S+V E QL Sbjct: 1 MDELYLDNIDEFVNDQDKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESSAQLHATYLVSGKSVDKGQTSHKVSVVKEEQL 83 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107882.1674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107882.1674.1 >prot_M-pyrifera_M_contig107882.1674.1 ID=prot_M-pyrifera_M_contig107882.1674.1|Name=mRNA_M-pyrifera_M_contig107882.1674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp MAVEEEYFENLRQWVIDEKRCVTFRWLACSLSVSSNTAKRMLFAFCDREQback to top mRNA from alignment at M-pyrifera_M_contig107882:310..612+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107882.1674.1 ID=mRNA_M-pyrifera_M_contig107882.1674.1|Name=mRNA_M-pyrifera_M_contig107882.1674.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig107882:310..612+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107882:310..612+ >mRNA_M-pyrifera_M_contig107882.1674.1 ID=mRNA_M-pyrifera_M_contig107882.1674.1|Name=mRNA_M-pyrifera_M_contig107882.1674.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig107882:310..612+ (Macrocystis pyrifera P11B4 male)back to top |