prot_M-pyrifera_M_contig10782.1661.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig10782.1661.1
Unique Name	prot_M-pyrifera_M_contig10782.1661.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	193

Homology

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BLAST of mRNA_M-pyrifera_M_contig10782.1661.1 vs. uniprot
Match: A0A6H5K3S5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3S5_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.380e-61
Identity = 114/206 (55.34%), Postives = 131/206 (63.59%), Query Frame = 0

Query:    1 MRAVETLRQRISLPMGGGAAQGYTPVHPSDSEDADXXXXXXXLGTGGEEFGEGSRARGRGVGR---------------VSAGGGRRGGREEDLLWPPYTPLYTNMKVLRRKRLDASMVYYRAGKCTKVCFLMSLWGVSFLSWLGYTLARGSAYILPKDSVETKLTLSHSLFGAAAMYFVCSCLSGYSWYKSSYGTRPLPTMGDTSL 191
            MRAVETLRQR+   +G      Y PV  SDS    XXXX       G  FG G R + R + R                             LLWPPYTPLYTNMKVLRRKRLDASM+Y RAG CTK+CFL SLWG SFL+WLG+TLA GS YI+P+D   T L  S S+FGAAAMY VC+CL+GYSWYKSS+G RPLPT+GD++L
Sbjct:    2 MRAVETLRQRLPPSLG------YAPVLLSDSXXXXXXXXRGEFEIAGGNFG-GGRHQDRDLRRPRRXXXXXXXXXXXXXXXXXXXXXXXXXXLLWPPYTPLYTNMKVLRRKRLDASMMYSRAGPCTKICFLTSLWGASFLTWLGFTLASGSPYIIPEDPPATNLARSRSVFGAAAMYLVCACLTGYSWYKSSWGARPLPTLGDSTL 200

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig10782.1661.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig10782.1661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K3S5_9PHAE	1.380e-61	55.34	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 134..152
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 113..133
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..112
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 175..192
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 153..174
None	No IPR available	TMHMM	TMhelix		coord: 149..171
None	No IPR available	TMHMM	TMhelix		coord: 112..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig10782	contig	M-pyrifera_M_contig10782:2779..4112 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig10782.1661.1	mRNA_M-pyrifera_M_contig10782.1661.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig10782 2779..4112 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig10782.1661.1 ID=prot_M-pyrifera_M_contig10782.1661.1|Name=mRNA_M-pyrifera_M_contig10782.1661.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MRAVETLRQRISLPMGGGAAQGYTPVHPSDSEDADGDGSDYDLGTGGEEF
GEGSRARGRGVGRVSAGGGRRGGREEDLLWPPYTPLYTNMKVLRRKRLDA
SMVYYRAGKCTKVCFLMSLWGVSFLSWLGYTLARGSAYILPKDSVETKLT
LSHSLFGAAAMYFVCSCLSGYSWYKSSYGTRPLPTMGDTSLQ*