prot_M-pyrifera_M_contig107806.1659.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107806.1659.1
Unique Nameprot_M-pyrifera_M_contig107806.1659.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107806.1659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 17..45
e-value: 0.31
score: 20.1
coord: 75..102
e-value: 5.3
score: 12.0
coord: 46..73
e-value: 0.041
score: 23.0
coord: 103..130
e-value: 0.0035
score: 26.6
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 1..139
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 1..139
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..143
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..77
e-value: 2.3E-14
score: 55.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 78..144
e-value: 7.5E-16
score: 60.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 49..68
e-value: 0.27
score: 11.4
coord: 78..96
e-value: 0.17
score: 12.0
coord: 17..40
e-value: 0.0012
score: 18.7
coord: 103..125
e-value: 3.5E-4
score: 20.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107806contigM-pyrifera_M_contig107806:174..605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107806.1659.1mRNA_M-pyrifera_M_contig107806.1659.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107806 174..605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107806.1659.1 ID=prot_M-pyrifera_M_contig107806.1659.1|Name=mRNA_M-pyrifera_M_contig107806.1659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
LDDDAIETLCKGMIRGSAHLTRLDLADNSEIGPLGAKHIAEMLSGHRALR
RLSLAWTSLGDAGVAEIARVLSDSIAPLRRLKLASCGMKDAGAAALGSSL
APNTTLRELSLTGNTVTAAGAIVIAGSLATNGALRTLDVSECPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt