prot_M-pyrifera_M_contig107632.1624.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107632.1624.1
Unique Nameprot_M-pyrifera_M_contig107632.1624.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
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BLAST of mRNA_M-pyrifera_M_contig107632.1624.1 vs. uniprot
Match: A0A5A8D1F1_CAFRO (DNA replication licensing factor MCM2 n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8D1F1_CAFRO)

HSP 1 Score: 91.7 bits (226), Expect = 9.060e-19
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0 
Query:    2 DGSEEGEDLLAEDTLAADYQRIAALDTYDARDLDEREFAGLTAAERLAAEEELAQRDAARGLRPEGLVGERMSEEERG-TFHERMRRMRRAVRPGEXXXXXXXEEGYAPFDIANYDVPLAEWIATAPVRAEIRRQFTEFLTTF 143
            D   EGEDL+ +  + ADY+ I  LD YD   L     A +    R AAE E+A+RDAARGLRP+GL  +   +E++  T+ +R RR++R  +           E YAPF++  Y VPL EWIA    RAE+RR+F  FL  +
Sbjct:   42 DEDSEGEDLMDDAKMQADYRAIQELDQYDPTMLAADGDAAVDHDARRAAEIEMARRDAARGLRPQGLDDDDYFDEDQDETYQDRQRRLKRMRKAA----AGDEPEDYAPFELGTYSVPLREWIAQEQTRAEVRRRFRWFLDNY 180
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107632.1624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5A8D1F1_CAFRO9.060e-1941.96DNA replication licensing factor MCM2 n=2 Tax=Sar ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008045DNA replication licensing factor Mcm2PFAMPF12619MCM2_Ncoord: 4..92
e-value: 2.2E-11
score: 44.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107632contigM-pyrifera_M_contig107632:35..463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107632.1624.1mRNA_M-pyrifera_M_contig107632.1624.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107632 35..463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107632.1624.1 ID=prot_M-pyrifera_M_contig107632.1624.1|Name=mRNA_M-pyrifera_M_contig107632.1624.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
EDGSEEGEDLLAEDTLAADYQRIAALDTYDARDLDEREFAGLTAAERLAA
EEELAQRDAARGLRPEGLVGERMSEEERGTFHERMRRMRRAVRPGEGEGE
GEGEEGYAPFDIANYDVPLAEWIATAPVRAEIRRQFTEFLTTF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008045MCM2