prot_M-pyrifera_M_contig107623.1620.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107623.1620.1
Unique Nameprot_M-pyrifera_M_contig107623.1620.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length42
Homology
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: A0A6C7E9Y4_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E9Y4_ILUCY)

HSP 1 Score: 55.8 bits (133), Expect = 5.870e-9
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    2 SDAAIVLVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            SDAAIVL+V+ AGT+ LK+AGP+VLG RRLP  VQ+++DLL
Sbjct:    2 SDAAIVLLVMTAGTYVLKSAGPLVLGTRRLPASVQQLVDLL 42          
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: A0A7Y1ZXH0_9ACTN (AzlD domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZXH0_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 4.740e-8
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    6 IVLVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            +VL+VLAAGTF LKAAGP+ LG+R LP R+QRV+D+L
Sbjct:    6 LVLIVLAAGTFGLKAAGPLALGNRELPVRMQRVVDVL 42          
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: A0A524MXD8_9ACTN (AzlD domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524MXD8_9ACTN)

HSP 1 Score: 48.5 bits (114), Expect = 4.350e-6
Identity = 22/36 (61.11%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    7 VLVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            VL+++  GT+ALK+AGP+VLGDR LP RV++++DLL
Sbjct:    7 VLIIMTIGTYALKSAGPLVLGDRVLPLRVRQIVDLL 42          
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: UPI001C3D31F3 (AzlD domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D31F3)

HSP 1 Score: 47.0 bits (110), Expect = 1.710e-5
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 0
Query:   11 LAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            LAAGT+A+KAAGP+VLG RRLP  V R+ DLL
Sbjct:    9 LAAGTYAMKAAGPLVLGGRRLPPGVTRITDLL 40          
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: UPI001C3D02AD (AzlD domain-containing protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D02AD)

HSP 1 Score: 45.4 bits (106), Expect = 6.700e-5
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    8 LVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            ++ LAAGT+ALKAAGP++LG R LP  V RV DLL
Sbjct:    6 ILALAAGTYALKAAGPLLLGGRELPGLVARVADLL 40          
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Match: UPI00196109D0 (AzlD domain-containing protein n=1 Tax=Tenggerimyces flavus TaxID=1708749 RepID=UPI00196109D0)

HSP 1 Score: 45.4 bits (106), Expect = 7.100e-5
Identity = 21/37 (56.76%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    6 IVLVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL 42
            I +++LA GTF +KAAGP+VLG+R LP+R++ +I LL
Sbjct:    6 ITIILLAVGTFLIKAAGPLVLGERELPERLRSLIALL 42          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107623.1620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6C7E9Y4_ILUCY5.870e-968.29Uncharacterized protein n=1 Tax=Ilumatobacter cocc... [more]
A0A7Y1ZXH0_9ACTN4.740e-870.27AzlD domain-containing protein n=1 Tax=Ilumatobact... [more]
A0A524MXD8_9ACTN4.350e-661.11AzlD domain-containing protein n=1 Tax=Acidimicrob... [more]
UPI001C3D31F31.710e-571.88AzlD domain-containing protein n=1 Tax=Miltoncosta... [more]
UPI001C3D02AD6.700e-565.71AzlD domain-containing protein n=1 Tax=Miltoncosta... [more]
UPI00196109D07.100e-556.76AzlD domain-containing protein n=1 Tax=Tenggerimyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107623contigM-pyrifera_M_contig107623:494..619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107623.1620.1mRNA_M-pyrifera_M_contig107623.1620.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107623 494..619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107623.1620.1 ID=prot_M-pyrifera_M_contig107623.1620.1|Name=mRNA_M-pyrifera_M_contig107623.1620.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=42bp
VSDAAIVLVVLAAGTFALKAAGPIVLGDRRLPDRVQRVIDLL
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