prot_M-pyrifera_M_contig107510.1603.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107510.1603.1
Unique Nameprot_M-pyrifera_M_contig107510.1603.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length206
Homology
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BLAST of mRNA_M-pyrifera_M_contig107510.1603.1 vs. uniprot
Match: A0A6I6A712_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A712_9PLAN)

HSP 1 Score: 389 bits (1000), Expect = 1.370e-134
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0 
Query:    1 LGFVFFAFLVLLLLPYQLANRRFLHATEAVLPEVPRTPLLIASPYANGAITHELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMITLVWMHATFAGLALFWKAFITLDLCLTVAIYVWFVRRAFRDPPQGLATVEINQLEKTCVITSADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRADIELNLVWRDPPV 205
            LGFVFFAFLVLLLLPYQL NRRFLHATEAVLPEVPRTPLLIA+P ANGAITHELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMI LVW HATFA LALFWKAFI LDLCLTV IY+WFVRRAFRDPPQGLATVEI+QLEKTCV+TSADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRA+IELNLVWR+ PV
Sbjct:   67 LGFVFFAFLVLLLLPYQLVNRRFLHATEAVLPEVPRTPLLIATPCANGAITHELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMIALVWTHATFADLALFWKAFIALDLCLTVVIYMWFVRRAFRDPPQGLATVEIDQLEKTCVMTSADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRAEIELNLVWRERPV 271
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BLAST of mRNA_M-pyrifera_M_contig107510.1603.1 vs. uniprot
Match: A0A517WA42_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WA42_9PLAN)

HSP 1 Score: 381 bits (978), Expect = 3.030e-131
Identity = 190/206 (92.23%), Postives = 195/206 (94.66%), Query Frame = 0 
Query:    1 LGFVFFAFLVLLLLPYQLANRRFLHATEAVLPEVPRTPLLIASPYANGAITHELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMITLVWMHATFAGLALFWKAFITLDLCLTVAIYVWFVRRAFRDPPQGLATVEINQLEKTCVITSADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRADIELNLVWRDPPVT 206
            LGFVFFAFLVLLLLPYQLANR FLHATEAVLPEVPRTPLLIA+PYANGAITHEL QTPSGIVLKP DNP GRMLWFGCLWPLFTGVVMI LVW HATFA LALFWKAFITLDLCLTVAIYVWFVRRAFRD PQGLATVEINQLEKTCVI+SADESISLDVDQ+IAVQLCAAWLKIEDLDHQ EDYDNKH RA+IELNLVWR+ PVT
Sbjct:   67 LGFVFFAFLVLLLLPYQLANRCFLHATEAVLPEVPRTPLLIATPYANGAITHELVQTPSGIVLKPRDNPNGRMLWFGCLWPLFTGVVMIALVWTHATFADLALFWKAFITLDLCLTVAIYVWFVRRAFRDSPQGLATVEINQLEKTCVISSADESISLDVDQMIAVQLCAAWLKIEDLDHQGEDYDNKHGRAEIELNLVWRERPVT 272
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BLAST of mRNA_M-pyrifera_M_contig107510.1603.1 vs. uniprot
Match: A0A518A426_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A426_9PLAN)

HSP 1 Score: 297 bits (761), Expect = 3.190e-98
Identity = 150/206 (72.82%), Postives = 166/206 (80.58%), Query Frame = 0 
Query:    1 LGFVFFAFLVLLLLPYQLANRRFLHATEAVLPEVPRTPLLIASPYANGAITHELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMITLVWMHATFAGLALFWKAF----ITLDLCLTVAIYVWFVRRAFRDPPQGLATVEINQLEKTCVITSADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRADIELNLVWRD 202
            L F FFA LVLLLLP QLANRRFLHA   VLPEVPRTPLLIASPYANGAITHEL QTPS IVL+P  NPYG + WFG LWP+FTGVVMI LVW  A FA L  FWK F    +TL LCL V+I+VW V RAFRDPP+GLA VEI+QL KTCVIT   ES+++DV QI+AVQLCAAWLKIEDLDH+D+DYDNK    ++ELNLVWRD
Sbjct:   67 LVFAFFALLVLLLLPSQLANRRFLHAAAEVLPEVPRTPLLIASPYANGAITHELVQTPSSIVLQPRANPYGGLPWFGYLWPIFTGVVMIMLVWTPAFFADLDFFWKYFWKTVLTLGLCLNVSIFVWIVSRAFRDPPEGLAVVEIDQLRKTCVITREGESMTIDVRQILAVQLCAAWLKIEDLDHEDDDYDNKQSHGEVELNLVWRD 272
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107510.1603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6I6A712_9PLAN1.370e-13493.17Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A517WA42_9PLAN3.030e-13192.23Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
A0A518A426_9PLAN3.190e-9872.82Uncharacterized protein n=4 Tax=Gimesia panareensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.846
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107510contigM-pyrifera_M_contig107510:1..618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107510.1603.1mRNA_M-pyrifera_M_contig107510.1603.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107510 1..618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107510.1603.1 ID=prot_M-pyrifera_M_contig107510.1603.1|Name=mRNA_M-pyrifera_M_contig107510.1603.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
LGFVFFAFLVLLLLPYQLANRRFLHATEAVLPEVPRTPLLIASPYANGAI
THELEQTPSGIVLKPLDNPYGRMLWFGCLWPLFTGVVMITLVWMHATFAG
LALFWKAFITLDLCLTVAIYVWFVRRAFRDPPQGLATVEINQLEKTCVIT
SADESISLDVDQIIAVQLCAAWLKIEDLDHQDEDYDNKHMRADIELNLVW
RDPPVT
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