prot_M-pyrifera_M_contig107501.1599.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107501.1599.1
Unique Nameprot_M-pyrifera_M_contig107501.1599.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length154
Homology
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A067BPS3_SAPPC (DRMBL domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BPS3_SAPPC)

HSP 1 Score: 63.5 bits (153), Expect = 3.590e-9
Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 0
Query:    1 GDFRFLPTLH-----TPLLHS-LRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITP-TQHSRITTDSTSARIRVLPMRALTLTNLQSLL 138
            GDFR+ P++      +P  +S  R D V+LDTTY      H     A  +A R + L     P  LF+ G+Y IGKE L+M+ A  L  KVFV+  +   +      C   P T+  R+TT+S++  + V+PM  L    +++LL
Sbjct:   29 GDFRYDPSMLLNRYLSPFTNSNQRLDGVYLDTTYCXTQHCHPTQAVAIAEAKRLVDLHQNDRP--LFLVGSYSIGKERLFMDVAAHLDCKVFVERAKLSLLS-----CFEWPETELRRLTTESSTTNLHVVPMNHLNFDGMRALL 166          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A7S1Y4I3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4I3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.140e-7
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    1 GDFRFLPTLHTPLLHS---------LRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRY-----GGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRR 91
            GDFR+     T L HS         +R + +FLDTTY   P    P+Q  A +A  E VLR           +LF+FGAY IGKE +++  A+ L  KV+VD RR
Sbjct:  151 GDFRW--NKETMLQHSALRAFSTVQVRLNELFLDTTYC-DPKYDLPTQQQAIEAATEAVLREIERARRTKQRILFLFGAYTIGKERIYLSVAERLDCKVYVDRRR 252          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: UPI001EDEC49A (DNA cross-link repair 1A protein-like n=2 Tax=Daphnia TaxID=6668 RepID=UPI001EDEC49A)

HSP 1 Score: 56.2 bits (134), Expect = 2.760e-6
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0
Query:    1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSLS 142
            GDFR  P++    L+ L+    D ++LDTTY        P+Q      +R +V RY      +L + G Y IGKE ++M AA+ L  KV+    +++ ++ + D  I      SR+ T    A + V+ M  +   NL++ L SLS
Sbjct:  607 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYAFKYQKLLVICGTYTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKI-----SSRLATSPLEASVHVVNMGDVKPANLKNYLDSLS 744          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: E9FWN3_DAPPU (Lactamase_B domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9FWN3_DAPPU)

HSP 1 Score: 55.8 bits (133), Expect = 3.080e-6
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0
Query:    1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSLS 142
            GDFR  P++    L+ L+    D ++LDTTY        P+Q      +R +V RY      +L + G Y IGKE ++M AA+ L  KV+    +++ ++ + D  I      SR+ T    A + V+ M  +   NL++ L SLS
Sbjct:  119 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYALKYQKLLVICGTYTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKI-----SSRLATSPLEASVHVVNMGDVKPANLKNYLDSLS 256          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A8J2WDB0_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WDB0_9CRUS)

HSP 1 Score: 55.8 bits (133), Expect = 3.760e-6
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0
Query:    1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPGVLFVF-GAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSL 141
            GDFR  P++    L+ L+    D ++LDTTY        PSQ      +R +V RY      L V  G Y IGKE ++M AA+ L  K++    +++ ++     C+  P    R+  +   A + V  M  +   NL+  L +L
Sbjct:  624 GDFRAHPSMER--LYELKQRPIDDLYLDTTYCDEHYE-LPSQEEVLSYIRRLVRRYASKHQKLLVISGTYTIGKEKVFMAAAEELNSKIWAPTEKRRVLN-----CLDDPVLSGRLIANPLEASVHVANMGDVKPANLKKYLDNL 760          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A0P5DK33_9CRUS (DNA cross-link repair 1A protein n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5DK33_9CRUS)

HSP 1 Score: 55.5 bits (132), Expect = 5.090e-6
Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 0
Query:    1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSL 141
            GDFR  P++    L+ L+    D ++LDTTY        P+Q      +R +V RY      +L V G Y IGKE ++M AA+ L  KV+    +++ ++ + D  I       R++ D   A + V+ M  +   NL+  L +L
Sbjct:  593 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYANKHQKLLVVSGTYTIGKEKVFMTAAEELNSKVWAPTEKRRILNCLEDFEI-----SDRLSNDPLEAGVHVVNMGDIKPANLKQYLDNL 729          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A3B0K8G3_DROGU (Blast:DNA cross-link repair protein SNM1 n=2 Tax=obscura subgroup TaxID=32357 RepID=A0A3B0K8G3_DROGU)

HSP 1 Score: 53.9 bits (128), Expect = 1.710e-5
Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    1 GDFRFLPTLHT-PLL-HSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPG--VLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPM 126
            GDFR    + + P+  +++  D ++LDTTY            + ++ +  +   +  +PG  +L+V GAYVIGKE +W+  A     KV+ +  R+ A+D     C+  P   +R+T D   A + V+ M
Sbjct:  413 GDFRASFEMESLPIFWNNIDIDLLYLDTTYLSESYDFCHQTESVSRLLHLVQNFHERNPGKRILYVCGAYVIGKEKIWLALAKKFCLKVWTEAHRRVAID-----CLEWPELQTRMTADPYQANLHVIAM 537          
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A7R9RG15_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9RG15_9CRUS)

HSP 1 Score: 53.5 bits (127), Expect = 2.220e-5
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    1 GDFRFLPTLHT-PLLHSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIV----LRYGGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNL 134
            GDFR    L   P L +   D ++LDTT        FPSQ    + VR IV    + YG    +L V G Y IGKE +++ AA+ L  K++    + + +  + D  +        +T D   AR+ VLPM+ L +T L
Sbjct:  336 GDFRAENFLQRHPFLLNKNIDVLYLDTTXXXXXXC-FPSQSEVLEHVRSIVNNAMVIYGN---ILIVCGTYTIGKEKVFLAAAETLGSKIWAPKWKVQILRCLEDRYL-----EFLLTEDPNLARVHVLPMKQLNITEL 465          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A067BPS3_SAPPC3.590e-934.48DRMBL domain-containing protein n=1 Tax=Saprolegni... [more]
A0A7S1Y4I3_9STRA5.140e-740.00Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
UPI001EDEC49A2.760e-631.51DNA cross-link repair 1A protein-like n=2 Tax=Daph... [more]
E9FWN3_DAPPU3.080e-631.51Lactamase_B domain-containing protein n=1 Tax=Daph... [more]
A0A8J2WDB0_9CRUS3.760e-629.66Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A0P5DK33_9CRUS5.090e-630.34DNA cross-link repair 1A protein n=2 Tax=Daphnia m... [more]
A0A3B0K8G3_DROGU1.710e-529.23Blast:DNA cross-link repair protein SNM1 n=2 Tax=o... [more]
A0A7R9RG15_9CRUS2.220e-533.09Hypothetical protein (Fragment) n=1 Tax=Argulus fo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 1..33
e-value: 4.6E-24
score: 87.4
NoneNo IPR availableGENE3D3.40.50.12650coord: 35..151
e-value: 4.6E-24
score: 87.4
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107501contigM-pyrifera_M_contig107501:7..468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107501.1599.1mRNA_M-pyrifera_M_contig107501.1599.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107501 7..468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107501.1599.1 ID=prot_M-pyrifera_M_contig107501.1599.1|Name=mRNA_M-pyrifera_M_contig107501.1599.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
GDFRFLPTLHTPLLHSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIV
LRYGGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHD
LCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSLSHPLSTSQS
SRPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro