mRNA_M-pyrifera_M_contig107501.1599.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A067BPS3_SAPPC (DRMBL domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BPS3_SAPPC) HSP 1 Score: 63.5 bits (153), Expect = 3.590e-9 Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 1 GDFRFLPTLH-----TPLLHS-LRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITP-TQHSRITTDSTSARIRVLPMRALTLTNLQSLL 414 GDFR+ P++ +P +S R D V+LDTTY H A +A R + L P LF+ G+Y IGKE L+M+ A L KVFV+ + + C P T+ R+TT+S++ + V+PM L +++LL Sbjct: 29 GDFRYDPSMLLNRYLSPFTNSNQRLDGVYLDTTYCXTQHCHPTQAVAIAEAKRLVDLHQNDRP--LFLVGSYSIGKERLFMDVAAHLDCKVFVERAKLSLLS-----CFEWPETELRRLTTESSTTNLHVVPMNHLNFDGMRALL 166
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A7S1Y4I3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4I3_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 5.140e-7 Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 GDFRFLPTLHTPLLHS---------LRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRY-----GGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRR 273 GDFR+ T L HS +R + +FLDTTY P P+Q A +A E VLR +LF+FGAY IGKE +++ A+ L KV+VD RR Sbjct: 151 GDFRW--NKETMLQHSALRAFSTVQVRLNELFLDTTYC-DPKYDLPTQQQAIEAATEAVLREIERARRTKQRILFLFGAYTIGKERIYLSVAERLDCKVYVDRRR 252
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: UPI001EDEC49A (DNA cross-link repair 1A protein-like n=2 Tax=Daphnia TaxID=6668 RepID=UPI001EDEC49A) HSP 1 Score: 56.2 bits (134), Expect = 2.760e-6 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSLS 426 GDFR P++ L+ L+ D ++LDTTY P+Q +R +V RY +L + G Y IGKE ++M AA+ L KV+ +++ ++ + D I SR+ T A + V+ M + NL++ L SLS Sbjct: 607 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYAFKYQKLLVICGTYTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKI-----SSRLATSPLEASVHVVNMGDVKPANLKNYLDSLS 744
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: E9FWN3_DAPPU (Lactamase_B domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9FWN3_DAPPU) HSP 1 Score: 55.8 bits (133), Expect = 3.080e-6 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSLS 426 GDFR P++ L+ L+ D ++LDTTY P+Q +R +V RY +L + G Y IGKE ++M AA+ L KV+ +++ ++ + D I SR+ T A + V+ M + NL++ L SLS Sbjct: 119 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYALKYQKLLVICGTYTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKI-----SSRLATSPLEASVHVVNMGDVKPANLKNYLDSLS 256
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A8J2WDB0_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WDB0_9CRUS) HSP 1 Score: 55.8 bits (133), Expect = 3.760e-6 Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 1 Query: 1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPGVLFVF-GAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSL 423 GDFR P++ L+ L+ D ++LDTTY PSQ +R +V RY L V G Y IGKE ++M AA+ L K++ +++ ++ C+ P R+ + A + V M + NL+ L +L Sbjct: 624 GDFRAHPSMER--LYELKQRPIDDLYLDTTYCDEHYE-LPSQEEVLSYIRRLVRRYASKHQKLLVISGTYTIGKEKVFMAAAEELNSKIWAPTEKRRVLN-----CLDDPVLSGRLIANPLEASVHVANMGDVKPANLKKYLDNL 760
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A0P5DK33_9CRUS (DNA cross-link repair 1A protein n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5DK33_9CRUS) HSP 1 Score: 55.5 bits (132), Expect = 5.090e-6 Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 1 GDFRFLPTLHTPLLHSLRT---DTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGD-PGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNLQSLLKSL 423 GDFR P++ L+ L+ D ++LDTTY P+Q +R +V RY +L V G Y IGKE ++M AA+ L KV+ +++ ++ + D I R++ D A + V+ M + NL+ L +L Sbjct: 593 GDFRAHPSMER--LYELKQRPIDELYLDTTYCDEHYE-LPAQEEVLSYIRRLVRRYANKHQKLLVVSGTYTIGKEKVFMTAAEELNSKVWAPTEKRRILNCLEDFEI-----SDRLSNDPLEAGVHVVNMGDIKPANLKQYLDNL 729
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A3B0K8G3_DROGU (Blast:DNA cross-link repair protein SNM1 n=2 Tax=obscura subgroup TaxID=32357 RepID=A0A3B0K8G3_DROGU) HSP 1 Score: 53.9 bits (128), Expect = 1.710e-5 Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 1 GDFRFLPTLHT-PLL-HSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVLRYGGDPG--VLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPM 378 GDFR + + P+ +++ D ++LDTTY + ++ + + + +PG +L+V GAYVIGKE +W+ A KV+ + R+ A+D C+ P +R+T D A + V+ M Sbjct: 413 GDFRASFEMESLPIFWNNIDIDLLYLDTTYLSESYDFCHQTESVSRLLHLVQNFHERNPGKRILYVCGAYVIGKEKIWLALAKKFCLKVWTEAHRRVAID-----CLEWPELQTRMTADPYQANLHVIAM 537
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Match: A0A7R9RG15_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9RG15_9CRUS) HSP 1 Score: 53.5 bits (127), Expect = 2.220e-5 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 1 GDFRFLPTLHT-PLLHSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIV----LRYGGDPGVLFVFGAYVIGKEMLWMEAADALKEKVFVDGRRKKAMDDMHDLCIITPTQHSRITTDSTSARIRVLPMRALTLTNL 402 GDFR L P L + D ++LDTT FPSQ + VR IV + YG +L V G Y IGKE +++ AA+ L K++ + + + + D + +T D AR+ VLPM+ L +T L Sbjct: 336 GDFRAENFLQRHPFLLNKNIDVLYLDTTXXXXXXC-FPSQSEVLEHVRSIVNNAMVIYGN---ILIVCGTYTIGKEKVFLAAAETLGSKIWAPKWKVQILRCLEDRYL-----EFLLTEDPNLARVHVLPMKQLNITEL 465 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107501.1599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107501.1599.1 >prot_M-pyrifera_M_contig107501.1599.1 ID=prot_M-pyrifera_M_contig107501.1599.1|Name=mRNA_M-pyrifera_M_contig107501.1599.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp GDFRFLPTLHTPLLHSLRTDTVFLDTTYARHPLRHFPSQYAATQAVREIVback to top mRNA from alignment at M-pyrifera_M_contig107501:7..468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107501.1599.1 ID=mRNA_M-pyrifera_M_contig107501.1599.1|Name=mRNA_M-pyrifera_M_contig107501.1599.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig107501:7..468+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107501:7..468+ >mRNA_M-pyrifera_M_contig107501.1599.1 ID=mRNA_M-pyrifera_M_contig107501.1599.1|Name=mRNA_M-pyrifera_M_contig107501.1599.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig107501:7..468+ (Macrocystis pyrifera P11B4 male)back to top |