prot_M-pyrifera_M_contig107500.1598.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107500.1598.1
Unique Nameprot_M-pyrifera_M_contig107500.1598.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Match: A0A813AB03_9DINO (KDM8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AB03_9DINO)

HSP 1 Score: 111 bits (277), Expect = 1.430e-26
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = 0
Query:    7 ARNWGAMSWTWEYLASMARANPAV-VSVSRSEXXXXXXXXXXXXXEAVFRAIPASVSTSASSFYYLKQCDLFSLLPQLSADI---PWPCLSELLDHPLFLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSAPFLGLNSKYDAGTVCADVDL 163
            AR W A SW++E+LAS+  A+  V +S+S  E             +        S+++ +    Y+KQC+L  + P L  DI   P+P      D  +F+TP AW G  GS TG H DDE NVLV LKG KRV L+ PS+AP+L +N KYD+GTVCAD  L
Sbjct:    2 ARAWRAASWSFEHLASLPGADVQVPLSMSLEESSSATRKRSISLAQYC-----KSLASGSGHPGYVKQCELLDMFPFLQEDIGELPFP------DSHVFVTPYAWLGAPGSHTGLHQDDEDNVLVVLKGRKRVRLAHPSAAPWLYVNDKYDSGTVCADASL 151          
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Match: A0A7S1VMB7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMB7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.390e-16
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   70 YLKQCDLFSLLPQLSADIPWPCLSELLDHPL--FLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSAPFLGLNSKYDAGTVCADVDLRAL 166
            YLKQ ++F  +P L +D+    L  ++  P   FLT   W G  G+ TG H DDE NVL+Q++GTKRV +  PS    L  N+KYD+GT C D D+  L
Sbjct:    1 YLKQFEVFKAIPSLQSDLD---LRRVVWSPWTRFLTTYLWIGPKGATTGLHNDDENNVLMQIRGTKRVHVISPSHRAALQPNTKYDSGTECCDADIATL 96          
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Match: A0A7S3T6A2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T6A2_EMIHU)

HSP 1 Score: 53.1 bits (126), Expect = 1.580e-5
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   74 CDLFSLLPQLSAD---IPWPCLSELLDHP---LFLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSA 143
            C   S   QL+AD   + W  L E  +      F T + WAG GG VT  H+D   N L QL+G+KR++L PPS +
Sbjct:   55 CRQLSGSAQLAADLGEVGWRWLREACEAAGALPFKTAQLWAGHGGGVTPCHYDALHNFLAQLRGSKRLLLLPPSES 130          
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Match: A0A7S3T690_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T690_EMIHU)

HSP 1 Score: 53.1 bits (126), Expect = 2.470e-5
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   74 CDLFSLLPQLSAD---IPWPCLSELLDHP---LFLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSA 143
            C   S   QL+AD   + W  L E  +      F T + WAG GG VT  H+D   N L QL+G+KR++L PPS +
Sbjct:   55 CRQLSGSAQLAADLGEVGWRWLREACEAAGALPFKTAQLWAGHGGGVTPCHYDALHNFLAQLRGSKRLLLLPPSES 130          
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Match: R1G5Z6_EMIHU (JmjC domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G5Z6_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 7.160e-5
Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   82 QLSADIPWPCLSELLDHPLFLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSA 143
            QL+AD     L E      F T + WAG GG VT  H+D   N L QL+G+KR++L PPS +
Sbjct:  141 QLAAD-----LGEAAGALPFKTAQLWAGHGGGVTPCHYDALHNFLAQLRGSKRLLLLPPSES 197          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107500.1598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A813AB03_9DINO1.430e-2642.86KDM8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S1VMB7_9STRA1.390e-1644.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S3T6A2_EMIHU1.580e-540.79Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3T690_EMIHU2.470e-540.79Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1G5Z6_EMIHU7.160e-545.16JmjC domain-containing protein n=1 Tax=Emiliania h... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableGENE3D2.60.120.650coord: 1..166
e-value: 1.6E-24
score: 88.9
NoneNo IPR availablePANTHERPTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDcoord: 5..153
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 5..162
IPR041667Cupin-like domain 8PFAMPF13621Cupin_8coord: 8..164
e-value: 2.4E-15
score: 56.9
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 69..168
score: 11.599

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107500contigM-pyrifera_M_contig107500:64..567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107500.1598.1mRNA_M-pyrifera_M_contig107500.1598.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107500 64..567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107500.1598.1 ID=prot_M-pyrifera_M_contig107500.1598.1|Name=mRNA_M-pyrifera_M_contig107500.1598.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
CFHAGYARNWGAMSWTWEYLASMARANPAVVSVSRSEEEVEETKREEEEL
EAVFRAIPASVSTSASSFYYLKQCDLFSLLPQLSADIPWPCLSELLDHPL
FLTPRAWAGRGGSVTGTHWDDEKNVLVQLKGTKRVILSPPSSAPFLGLNS
KYDAGTVCADVDLRALAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041667Cupin_8
IPR003347JmjC_dom