prot_M-pyrifera_M_contig107486.1592.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107486.1592.1
Unique Nameprot_M-pyrifera_M_contig107486.1592.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
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BLAST of mRNA_M-pyrifera_M_contig107486.1592.1 vs. uniprot
Match: UPI001C26617B (glycoside hydrolase family 99-like domain-containing protein n=1 Tax=Geomonas TaxID=2651583 RepID=UPI001C26617B)

HSP 1 Score: 53.9 bits (128), Expect = 1.850e-6
Identity = 33/84 (39.29%), Postives = 42/84 (50.00%), Query Frame = 0 
Query:    3 VGAIRWDAWYWTKENGYDANRDIVGKTVTIDLYPEQFHVRVPFWGKLNGSEVVVGLE-NSTAVIGQENELASAFGVDFWAFCTY 85
            VGAIRWDAWY              G      L   Q+  R+PF+   NG +    L  +S  V+ +E  LASA G+D+WAFC Y
Sbjct:   24 VGAIRWDAWY-------------AGSPYEYSLSAPQWRGRLPFYAT-NGKDGRASLRADSQEVMDREIVLASAAGIDYWAFCYY 93
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107486.1592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001C26617B1.850e-639.29glycoside hydrolase family 99-like domain-containi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107486contigM-pyrifera_M_contig107486:202..459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107486.1592.1mRNA_M-pyrifera_M_contig107486.1592.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107486 202..459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107486.1592.1 ID=prot_M-pyrifera_M_contig107486.1592.1|Name=mRNA_M-pyrifera_M_contig107486.1592.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
VRVGAIRWDAWYWTKENGYDANRDIVGKTVTIDLYPEQFHVRVPFWGKLN
GSEVVVGLENSTAVIGQENELASAFGVDFWAFCTYP
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