prot_M-pyrifera_M_contig107462.1590.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107462.1590.1
Unique Nameprot_M-pyrifera_M_contig107462.1590.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
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BLAST of mRNA_M-pyrifera_M_contig107462.1590.1 vs. uniprot
Match: A0A7S4NIP6_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NIP6_9EUKA)

HSP 1 Score: 47.8 bits (112), Expect = 8.300e-5
Identity = 19/54 (35.19%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:    1 IQDLKRDVRGQMLTVAALLTQLRLMFTPLQQAKYLVWTRRNPACMQLVNSLWKD 54
            + +++  V   + T+   LT+++LM TP+QQAK+L W  +N A ++L+ S+W+ 
Sbjct:  231 VHEVRNQVLRWLTTMKCHLTEIQLMLTPIQQAKFLWWAEQNMAVLKLIESMWRS 284
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107462.1590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4NIP6_9EUKA8.300e-535.19Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107462contigM-pyrifera_M_contig107462:54..218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107462.1590.1mRNA_M-pyrifera_M_contig107462.1590.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107462 54..218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107462.1590.1 ID=prot_M-pyrifera_M_contig107462.1590.1|Name=mRNA_M-pyrifera_M_contig107462.1590.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
IQDLKRDVRGQMLTVAALLTQLRLMFTPLQQAKYLVWTRRNPACMQLVNS
LWKDV
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