prot_M-pyrifera_M_contig107197.1541.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107197.1541.1
Unique Nameprot_M-pyrifera_M_contig107197.1541.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig107197.1541.1 vs. uniprot
Match: A0A2E7KCB4_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCB4_9PLAN)

HSP 1 Score: 233 bits (595), Expect = 1.550e-77
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MTEQAGTSSWLKRIRIFTGLLLMALAVGGAVMLATAGGMSSGTLASGRSVTAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDSRAKSVGVKVKANEIIFHADGKWVATYRR 124
            MTEQAGTSSWLKRIRIFTGLLLMALAVGGAVMLATAGGMSSGTLASGRSVTAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDS+AKSVGVKVKANEIIFHADGKWVATYRR
Sbjct:    1 MTEQAGTSSWLKRIRIFTGLLLMALAVGGAVMLATAGGMSSGTLASGRSVTAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDSKAKSVGVKVKANEIIFHADGKWVATYRR 124
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BLAST of mRNA_M-pyrifera_M_contig107197.1541.1 vs. uniprot
Match: A0A518A1M8_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A1M8_9PLAN)

HSP 1 Score: 139 bits (349), Expect = 4.670e-40
Identity = 73/124 (58.87%), Postives = 89/124 (71.77%), Query Frame = 0 
Query:    1 MTEQAGTSSWLKRIRIFTGLLLMALAVGGAVMLATAGGMSSGTLASGRSVTAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDSRAKSVGVKVKANEIIFHADGKWVATYRR 124
            MTEQ  + SWL    IF G++L  L VGG V+ A  GG SSGTL SGRSVT  SDSW L++ Y  DT +IKTAGF I+VTP R++VD QR+A++D+ AK+V V VK+ EI  HADGKWV T RR
Sbjct:    1 MTEQTHSRSWLLWGGIFAGIMLFVLVVGGVVLAALNGGSSSGTLPSGRSVTTHSDSWNLESRYEKDTVSIKTAGFKIQVTPGRVDVDGQRVAYLDTAAKNVAVDVKSGEITVHADGKWVVTVRR 124
[Close]
BLAST of mRNA_M-pyrifera_M_contig107197.1541.1 vs. uniprot
Match: A0A8J8SUU7_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8SUU7_HALGN)

HSP 1 Score: 68.6 bits (166), Expect = 1.920e-12
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:   13 RIRIFTGLLLMALAVGGAVMLAT--AGGMSSGTLASGRSVTAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDSRAKSVGVKVKANEIIFHADGKWVAT 121
            R+    G+ +  L+ G A    T  AGG + GTLASGR+VTA SDS  L + ++ D+ATI+TAG  I V P  L VD   +A I+   K V V VK   + F ADG  V T
Sbjct:    3 RLHRCIGIAIPVLSGGIAAAFVTGCAGGSAGGTLASGRTVTANSDSLFLRSQFTKDSATIRTAGKQIVVAPKSLIVDGVPVAKIEEETKDVQVNVKNGNVTFQADGADVET 113
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107197.1541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7KCB4_9PLAN1.550e-7799.19Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A518A1M8_9PLAN4.670e-4058.87Uncharacterized protein n=4 Tax=Gimesia panareensi... [more]
A0A8J8SUU7_HALGN1.920e-1244.14Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availableTMHMMTMhelixcoord: 16..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107197contigM-pyrifera_M_contig107197:115..489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107197.1541.1mRNA_M-pyrifera_M_contig107197.1541.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107197 115..489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107197.1541.1 ID=prot_M-pyrifera_M_contig107197.1541.1|Name=mRNA_M-pyrifera_M_contig107197.1541.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MTEQAGTSSWLKRIRIFTGLLLMALAVGGAVMLATAGGMSSGTLASGRSV
TAQSDSWKLDATYSGDTATIKTAGFNIEVTPDRLNVDRQRIAFIDSRAKS
VGVKVKANEIIFHADGKWVATYRR*
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