prot_M-pyrifera_M_contig107084.1522.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107084.1522.1
Unique Nameprot_M-pyrifera_M_contig107084.1522.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
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BLAST of mRNA_M-pyrifera_M_contig107084.1522.1 vs. uniprot
Match: UPI001459016D (putative ankyrin repeat protein RF_0381 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001459016D)

HSP 1 Score: 55.5 bits (132), Expect = 6.290e-6
Identity = 48/143 (33.57%), Postives = 67/143 (46.85%), Query Frame = 0 
Query:    1 PLSSACKRGNLDVARALLDAGAHLV-------PSCLLCAVESGSIECIDLLFEHGADFND-----LRPLAEE-VGVGLLSVAFLVRKLLELGADPSERD-RYGCIPLHYAG--RNLVITKLLLSAAHDGCDVNVVDHFGRSAL 127
            PL     R   D+A+ LL   AH V        S + CAVESGS+E ++L+  HGAD N      + PL     G G+     L R LL+ GAD   +D R     L +A   +N  + + L++A   G D N  D+   + L
Sbjct:   80 PLMYCMVRHFCDIAKELLSRDAHAVHSQDRFGKSVIHCAVESGSVELLNLVLSHGADVNQTDWYGITPLMTLCAGTGIRHTTELCRVLLDAGADLELKDVRSKRTALQFAAVQKNTDLVQCLVAA---GADPNTTDNASLTPL 219
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107084.1522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001459016D6.290e-633.57putative ankyrin repeat protein RF_0381 n=1 Tax=Pe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 122..154
e-value: 0.071
score: 22.2
coord: 88..118
e-value: 450.0
score: 7.6
coord: 24..53
e-value: 0.36
score: 19.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..24
score: 8.816
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..157
score: 12.716
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 71..156
e-value: 3.5E-10
score: 40.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..167
score: 27.664
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..61
e-value: 5.8E-10
score: 40.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 68..167
e-value: 1.7E-24
score: 88.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..167
NoneNo IPR availablePANTHERPTHR24118FAMILY NOT NAMEDcoord: 1..167
IPR001995Peptidase A2A, retrovirus, catalyticPROSITEPS50175ASP_PROT_RETROVcoord: 142..160
score: 9.164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107084contigM-pyrifera_M_contig107084:6..611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107084.1522.1mRNA_M-pyrifera_M_contig107084.1522.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107084 6..611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107084.1522.1 ID=prot_M-pyrifera_M_contig107084.1522.1|Name=mRNA_M-pyrifera_M_contig107084.1522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
PLSSACKRGNLDVARALLDAGAHLVPSCLLCAVESGSIECIDLLFEHGAD
FNDLRPLAEEVGVGLLSVAFLVRKLLELGADPSERDRYGCIPLHYAGRNL
VITKLLLSAAHDGCDVNVVDHFGRSALHHAAEEDRTEGGEVVQELLDAGA
DVTVVDSLNWTPLHHAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR001995Peptidase_A2_cat